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Report for CCDS32864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32864.1 Public Homo sapiens 19 MIDN 24 110 108 CCDS HistoryNCBI Gene:90007Re-query CCDS DB by CCDS ID:32864.1Re-query CCDS DB by GeneID:90007See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32864.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300952.7 ENSP00000300952.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000300952.7Link to Ensembl Protein Viewer:ENSP00000300952.2Re-query CCDS DB by Nucleotide ID:ENST00000300952Re-query CCDS DB by Protein ID:ENSP00000300952
Original member Current member EBI ENST00000591446.7 ENSP00000467679.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591446.7Link to Ensembl Protein Viewer:ENSP00000467679.1Re-query CCDS DB by Nucleotide ID:ENST00000591446Re-query CCDS DB by Protein ID:ENSP00000467679
Original member Current member NCBI NM_001388474.1 NP_001375403.1 Accepted alive Link to Nucleotide Sequence:NM_001388474.1Link to Protein Sequence:NP_001375403.1Re-query CCDS DB by Nucleotide ID:NM_001388474Re-query CCDS DB by Protein ID:NP_001375403Link to BLAST:NP_001375403.1
Original member Current member NCBI NM_177401.5 NP_796375.3 Accepted alive Link to Nucleotide Sequence:NM_177401.5Link to Protein Sequence:NP_796375.3Re-query CCDS DB by Nucleotide ID:NM_177401Re-query CCDS DB by Protein ID:NP_796375Link to BLAST:NP_796375.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001375403.1 468 Q504T8 468 100% 0 0
NP_796375.3 468 Q504T8 468 100% 0 0

Chromosomal Locations for CCDS 32864.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1250297 1250529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1251562 1251649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1251839 1251901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1254167 1254478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1254902 1255061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1255422 1255694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1256995 1257272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGAGCCGCAGCCCGGCGGCGCCCGGAGCTGCCGGCGCGGGGCCCCCGGCGGCGCCTGCGAGCTGGGCC
CGGCGGCCGAGGCGGCGCCCATGAGCCTCGCCATCCACAGCACCACGGGCACCCGCTACGACCTGGCCGT
GCCGCCCGACGAGACGGTGGAGGGGCTGCGCAAGCGGTTGTCCCAGCGCCTCAAAGTGCCCAAGGAGCGC
CTGGCTCTTCTCCACAAAGACACCCGGCTCAGTTCGGGGAAGCTGCAGGAGTTCGGCGTGGGTGATGGCA
GCAAGCTGACCTTGGTACCCACCGTGGAAGCGGGCCTCATGTCTCAGGCCTCAAGGCCGGAACAGTCCGT
GATGCAAGCTCTCGAGAGTCTCACGGAGACGCAGGTCAGTGACTTCCTGTCGGGCCGTTCGCCACTGACA
CTGGCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCAGCTCGCGGCCCAGCACGCTCCACTGC
AACACCGCCATGTGCTGGCCGCTGCGGCCGCCGCCGCTGCTGCGCGGGGGGACCCCAGCATAGCCTCCCC
CGTGTCCTCGCCCTGCCGGCCGGTGTCCAGTGCCGCCCGAGTCCCCCCGGTGCCCACCAGCCCGTCCCCT
GCATCTCCCTCGCCCATCACAGCCGGCTCCTTCCGGTCCCACGCAGCCTCCACCACCTGCCCGGAGCAGA
TGGACTGCTCCCCCACGGCCAGCAGCAGTGCCAGTCCTGGTGCCAGCACCACGTCTACCCCAGGGGCCAG
CCCTGCCCCCCGCTCCCGAAAACCCGGCGCCGTCATCGAGAGCTTTGTGAATCACGCCCCGGGGGTCTTC
TCAGGGACCTTCTCTGGCACGCTACACCCCAACTGCCAAGACAGCAGCGGGCGGCCGCGGCGTGACATCG
GCACCATCCTGCAGATCCTGAACGACCTCCTGAGCGCCACCCGGCACTACCAGGGCATGCCCCCTTCGCT
GGCCCAGCTCCGCTGCCACGCCCAGTGCTCCCCGGCCTCACCGGCCCCCGACCTGGCCCCCAGAACTACC
TCCTGCGAGAAGCTCACGGCTGCCCCCTCAGCCTCCCTGCTGCAGGGCCAGAGCCAGATCCGCATGTGCA
AGCCCCCGGGGGACCGGCTTCGGCAGACAGAAAACCGCGCCACGCGCTGCAAGGTGGAACGGCTGCAGCT
GCTTCTGCAGCAGAAACGGCTCCGTAGAAAGGCCCGGCGGGACGCGCGGGGTCCGTACCACTGGTCACCC
AGCCGCAAGGCCGGCCGCAGCGACAGCAGTAGCAGCGGGGGCGGCGGCAGCCCCAGCGAGGCCTCCGGCT
TGGGCCTCGACTTCGAGGACTCCGTGTGGAAGCCAGAAGTCAACCCTGACATCAAGTCAGAGTTCGTGGT
GGCTTAG

Translation (468 aa):
MEPQPGGARSCRRGAPGGACELGPAAEAAPMSLAIHSTTGTRYDLAVPPDETVEGLRKRLSQRLKVPKER
LALLHKDTRLSSGKLQEFGVGDGSKLTLVPTVEAGLMSQASRPEQSVMQALESLTETQVSDFLSGRSPLT
LALRVGDHMMFVQLQLAAQHAPLQHRHVLAAAAAAAAARGDPSIASPVSSPCRPVSSAARVPPVPTSPSP
ASPSPITAGSFRSHAASTTCPEQMDCSPTASSSASPGASTTSTPGASPAPRSRKPGAVIESFVNHAPGVF
SGTFSGTLHPNCQDSSGRPRRDIGTILQILNDLLSATRHYQGMPPSLAQLRCHAQCSPASPAPDLAPRTT
SCEKLTAAPSASLLQGQSQIRMCKPPGDRLRQTENRATRCKVERLQLLLQQKRLRRKARRDARGPYHWSP
SRKAGRSDSSSSGGGGSPSEASGLGLDFEDSVWKPEVNPDIKSEFVVA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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