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Report for CCDS32861.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32861.1 Public Homo sapiens 19 GRIN3B 24 110 108 CCDS HistoryNCBI Gene:116444Re-query CCDS DB by CCDS ID:32861.1Re-query CCDS DB by GeneID:116444See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32861.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000234389.3 ENSP00000234389.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000234389.3Link to Ensembl Protein Viewer:ENSP00000234389.3Re-query CCDS DB by Nucleotide ID:ENST00000234389Re-query CCDS DB by Protein ID:ENSP00000234389
Original member Current member NCBI NM_138690.3 NP_619635.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138690.3Link to Protein Sequence:NP_619635.1Re-query CCDS DB by Nucleotide ID:NM_138690Re-query CCDS DB by Protein ID:NP_619635Link to BLAST:NP_619635.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619635.1 1043 O60391 1043 100% 0 0

Chromosomal Locations for CCDS 32861.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1000438 1000863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1003130 1003722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1004521 1005553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1007628 1007773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1007856 1007971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1008140 1008291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1008618 1008782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1008857 1008927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1009173 1009602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3132 nt):
ATGGAGTTTGTGCGGGCGCTGTGGCTGGGCCTGGCGCTGGCGCTGGGGCCGGGGTCCGCGGGGGGCCACC
CTCAGCCGTGCGGCGTCCTGGCGCGCCTCGGGGGCTCCGTGCGCCTGGGCGCCCTCCTGCCCCGCGCGCC
TCTCGCCCGCGCCCGCGCCCGCGCCGCCCTGGCCCGGGCCGCCCTGGCGCCGCGGCTGCCGCACAACCTG
AGCTTGGAGCTGGTGGTCGCCGCGCCCCCCGCCCGCGACCCCGCCTCGCTGACCCGCGGCCTGTGCCAGG
CGCTGGTGCCTCCGGGCGTGGCGGCCCTGCTCGCCTTTCCCGAGGCTCGGCCCGAGCTGCTGCAGCTGCA
CTTCCTGGCGGCGGCCACCGAGACCCCCGTGCTCAGCCTGCTGCGGCGGGAGGCGCGCGCGCCCCTCGGA
GCCCCGAACCCATTCCACCTGCAGCTGCACTGGGCCAGCCCCCTGGAGACGCTGCTGGATGTGCTGGTGG
CGGTGCTGCAGGCGCACGCCTGGGAAGACGTCGGCCTGGCCCTGTGCCGCACTCAGGACCCCGGCGGCCT
GGTGGCCCTCTGGACAAGCCGGGCTGGCCGGCCCCCACAGCTGGTCCTGGACCTAAGCCGGCGGGACACG
GGAGATGCAGGACTGCGGGCACGCCTGGCCCCGATGGCGGCGCCAGTGGGGGGTGAAGCACCGGTACCCG
CGGCGGTCCTCCTCGGCTGTGACATCGCCCGTGCCCGTCGGGTGCTGGAGGCCGTACCTCCCGGCCCCCA
CTGGCTGTTGGGGACACCACTGCCGCCCAAGGCCCTGCCCACCGCGGGGCTGCCACCAGGGCTGCTGGCG
CTGGGCGAGGTGGCACGACCCCCGCTGGAGGCCGCCATCCATGACATTGTGCAACTGGTGGCCCGGGCGC
TGGGCAGTGCGGCCCAGGTGCAGCCGAAGCGAGCCCTCCTCCCCGCCCCGGTCAACTGCGGGGACCTGCA
GCCGGCCGGGCCCGAGTCCCCGGGGCGCTTCTTGGCACGGTTCCTGGCCAACACGTCCTTCCAGGGCCGC
ACGGGCCCCGTGTGGGTGACAGGCAGCTCCCAGGTACACATGTCTCGGCACTTTAAGGTGTGGAGCCTTC
GCCGGGACCCACGGGGCGCCCCGGCCTGGGCCACGGTGGGCAGCTGGCGGGACGGCCAGCTGGACTTGGA
ACCGGGAGGTGCCTCTGCACGGCCCCCGCCCCCACAGGGTGCCCAGGTCTGGCCCAAGCTGCGTGTGGTA
ACGCTGTTGGAACACCCATTTGTGTTTGCCCGTGATCCAGACGAAGACGGGCAGTGCCCAGCGGGGCAGC
TGTGCCTGGACCCTGGCACCAACGACTCGGCCACCCTGGACGCACTGTTCGCCGCGCTGGCCAACGGCTC
AGCGCCCCGTGCCCTGCGCAAGTGCTGCTACGGCTACTGCATTGACCTGCTGGAGCGGCTGGCGGAGGAC
ACGCCCTTCGACTTCGAGCTGTACCTCGTGGGTGACGGCAAGTACGGCGCCCTGCGGGACGGCCGCTGGA
CCGGCCTGGTCGGGGACCTGCTGGCCGGCCGGGCCCACATGGCGGTCACCAGCTTCAGTATCAACTCCGC
CCGCTCACAGGTGGTGGACTTCACCAGCCCCTTCTTCTCCACCAGCCTGGGCATCATGGTGCGGGCACGG
GACACGGCCTCACCCATCGGTGCCTTTATGTGGCCCCTGCACTGGTCCACGTGGCTGGGCGTCTTTGCGG
CCCTGCACCTCACCGCGCTCTTCCTCACCGTGTACGAGTGGCGTAGCCCCTACGGCCTCACGCCACGTGG
CCGCAACCGCAGCACCGTCTTCTCCTACTCCTCAGCCCTCAACCTGTGCTACGCCATCCTCTTCAGACGC
ACCGTGTCCAGCAAGACGCCCAAGTGCCCCACGGGCCGCCTGCTCATGAACCTCTGGGCCATCTTCTGCC
TGCTGGTGCTGTCCAGCTACACGGCCAACCTGGCTGCCGTCATGGTCGGGGACAAGACCTTCGAGGAGCT
GTCGGGGATCCACGACCCCAAGCTGCACCACCCGGCGCAGGGCTTCCGCTTCGGCACCGTGTGGGAGAGC
AGCGCCGAGGCGTACATCAAGAAGAGCTTCCCCGACATGCACGCACACATGCGGCGCCACAGCGCGCCCA
CCACGCCCCGCGGCGTCGCCATGCTCACGAGCGACCCCCCCAAGCTCAACGCCTTCATCATGGACAAGTC
GCTCCTGGACTACGAGGTCTCCATCGACGCCGACTGCAAACTGCTGACCGTGGGAAAGCCCTTCGCCATT
GAGGGCTATGGGATCGGACTGCCCCAGAACTCGCCGCTCACCTCCAACCTGTCCGAGTTCATCAGCCGCT
ACAAGTCCTCCGGCTTCATCGACCTGCTCCACGACAAGTGGTACAAGATGGTGCCTTGCGGCAAGCGGGT
CTTTGCGGTTACAGAGACCCTGCAGATGAGCATCTACCACTTCGCGGGCCTCTTCGTGTTGCTGTGCCTG
GGCCTGGGCAGCGCTCTGCTCAGCTCGCTGGGCGAGCACGCCTTCTTCCGCCTGGCGCTGCCGCGCATCC
GCAAGGGGAGCAGGCTGCAGTACTGGCTGCACACCAGCCAGAAAATCCACCGCGCCCTCAACACGGAGCC
ACCAGAGGGGTCGAAGGAGGAGACGGCAGAGGCGGAGCCCAGCGGCCCCGAGGTGGAGCAGCAGCAGCAG
CAGCAGGACCAGCCAACGGCTCCGGAGGGCTGGAAACGGGCGCGCCGGGCCGTGGACAAGGAGCGCCGCG
TGCGCTTCCTGCTGGAGCCCGCCGTGGTTGTGGCACCCGAAGCGGACGCGGAGGCGGAGGCTGCGCCGCG
AGAGGGCCCCGTCTGGCTGTGCTCCTACGGCCGCCCGCCCGCCGCAAGGCCCACGGGGGCCCCCCAGCCC
GGGGAGCTGCAGGAGCTGGAGCGCCGCATCGAAGTCGCGCGTGAGCGGCTCCGCCAGGCCCTGGTGCGGC
GCGGCCAGCTCCTGGCACAGCTCGGGGACAGCGCACGTCACCGGCCTCGGCGCTTGCTTCAGGCCAGAGC
GGCCCCCGCGGAGGCCCCACCACACTCTGGCCGACCGGGGAGCCAGGAATGA

Translation (1043 aa):
MEFVRALWLGLALALGPGSAGGHPQPCGVLARLGGSVRLGALLPRAPLARARARAALARAALAPRLPHNL
SLELVVAAPPARDPASLTRGLCQALVPPGVAALLAFPEARPELLQLHFLAAATETPVLSLLRREARAPLG
APNPFHLQLHWASPLETLLDVLVAVLQAHAWEDVGLALCRTQDPGGLVALWTSRAGRPPQLVLDLSRRDT
GDAGLRARLAPMAAPVGGEAPVPAAVLLGCDIARARRVLEAVPPGPHWLLGTPLPPKALPTAGLPPGLLA
LGEVARPPLEAAIHDIVQLVARALGSAAQVQPKRALLPAPVNCGDLQPAGPESPGRFLARFLANTSFQGR
TGPVWVTGSSQVHMSRHFKVWSLRRDPRGAPAWATVGSWRDGQLDLEPGGASARPPPPQGAQVWPKLRVV
TLLEHPFVFARDPDEDGQCPAGQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAED
TPFDFELYLVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRAR
DTASPIGAFMWPLHWSTWLGVFAALHLTALFLTVYEWRSPYGLTPRGRNRSTVFSYSSALNLCYAILFRR
TVSSKTPKCPTGRLLMNLWAIFCLLVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPAQGFRFGTVWES
SAEAYIKKSFPDMHAHMRRHSAPTTPRGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKPFAI
EGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMSIYHFAGLFVLLCL
GLGSALLSSLGEHAFFRLALPRIRKGSRLQYWLHTSQKIHRALNTEPPEGSKEETAEAEPSGPEVEQQQQ
QQDQPTAPEGWKRARRAVDKERRVRFLLEPAVVVAPEADAEAEAAPREGPVWLCSYGRPPAARPTGAPQP
GELQELERRIEVARERLRQALVRRGQLLAQLGDSARHRPRRLLQARAAPAEAPPHSGRPGSQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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