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Report for CCDS32813.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32813.1 Public Homo sapiens 18 KLHL14 24 110 108 CCDS HistoryNCBI Gene:57565Re-query CCDS DB by CCDS ID:32813.1Re-query CCDS DB by GeneID:57565See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32813.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359358.9 ENSP00000352314.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359358.9Link to Ensembl Protein Viewer:ENSP00000352314.4Re-query CCDS DB by Nucleotide ID:ENST00000359358Re-query CCDS DB by Protein ID:ENSP00000352314
Original member Current member NCBI NM_020805.3 NP_065856.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020805.3Link to Protein Sequence:NP_065856.1Re-query CCDS DB by Nucleotide ID:NM_020805Re-query CCDS DB by Protein ID:NP_065856Link to BLAST:NP_065856.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065856.1 628 Q9P2G3-1 628 100% 0 0

Chromosomal Locations for CCDS 32813.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 32674657 32674797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32677173 32677330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32680169 32680327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32680409 32680599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32687155 32687233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32695463 32695552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32741928 32742049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 32769645 32770591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1887 nt):
ATGTCCAGATCCGGGGACAGGACCTCCACCTTCGACCCCAGCCACAGCGACAACCTGCTGCACGGCCTCA
ACCTGCTGTGGAGGAAGCAGCTGTTTTGCGACGTGACCCTGACGGCCCAGGGCCAGCAGTTCCATTGCCA
CAAGGCCGTGCTGGCCTCCTGCTCGCAGTACTTCCGATCGCTCTTCTCCAGCCACCCCCCTCTCGGGGGA
GGGGTCGGCGGCCAGGACGGCCTGGGGGCCCCCAAGGACCAGCAGCAGCCGCCGCAGCAGCAGCCGTCAC
AGCAGCAGCAGCCGCCGCCGCAGGAGGAGCCCGGGACTCCTTCTTCCTCCCCCGACGACAAGCTGCTGAC
CAGCCCCCGGGCCATCAACAACCTGGTGCTGCAGGGCTGCTCGTCCATCGGGCTGCGCCTGGTGCTCGAG
TACCTCTACACGGCCAACGTGACCCTGTCCCTGGACACGGTGGAGGAGGTGCTGTCGGTCAGCAAGATCC
TGCACATCCCCCAGGTCACCAAGCTCTGCGTGCAGTTCCTCAACGACCAGATCTCGGTGCAGAACTACAA
GCAGGTGTGCAAGATCGCCGCGCTGCACGGCCTGGAGGAGACCAAGAAGCTGGCCAACAAGTACCTGGTG
GAGGATGTGCTGCTGCTCAACTTCGAGGAGATGCGCGCCCTGCTGGACTCGCTGCCGCCCCCCGTGGAGT
CGGAGCTGGCGCTCTTCCAGATGTCCGTGCTGTGGCTGGAGCACGACCGCGAGACCCGCATGCAGTATGC
GCCTGACCTCATGAAGCGCCTCCGCTTCGCCCTCATCCCGGCCCCGGAGCTGGTGGAGCGGGTCCAGTCA
GTGGATTTCATGCGAACCGACCCGGTCTGCCAGAAGCTGCTGCTGGACGCCATGAACTACCACCTGATGC
CCTTCAGGCAGCACTGCAGGCAGAGCCTGGCCAGCAGAATTCGCTCTAACAAGAAAATGCTGTTATTGGT
TGGAGGGCTGCCTCCTGGACCGGACCGGCTCCCCAGCAATTTGGTTCAGTATTACGACGATGAAAAGAAG
ACATGGAAAATACTCACAATTATGCCATACAACAGTGCCCACCACTGCGTTGTGGAGGTGGAAAACTTCT
TGTTCGTGTTGGGTGGAGAGGACCAGTGGAATCCGAATGGAAAACACAGTACAAATTTTGTCAGCCGATA
TGATCCTCGATTTAATAGCTGGATTCAACTTCCACCCATGCAGGAAAGAAGAGCCAGTTTCTATGCATGT
CGGTTGGACAAGCATTTATACGTAATTGGTGGAAGGAATGAAACTGGCTACTTGTCCAGCGTGGAGTGCT
ATAACCTAGAAACGAATGAATGGCGCTATGTGTCCTCTTTGCCACAGCCTCTGGCGGCTCATGCGGGAGC
AGTGCACAATGGGAAAATATACATTTCAGGGGGTGTACACAATGGAGAATATGTCCCATGGCTATATTGC
TATGACCCAGTAATGGATGTCTGGGCTCGAAAACAAGATATGAACACAAAACGTGCAATTCACACTTTGG
CTGTAATGAATGATCGCTTGTATGCAATTGGAGGAAATCATTTGAAAGGTTTCTCCCACCTTGATGTAAT
GCTTGTGGAATGCTATGACCCAAAAGGTGACCAGTGGAATATACTCCAAACTCCCATTTTGGAGGGTCGA
AGTGGCCCTGGCTGTGCAGTGCTTGATGACAGCATTTACCTTGTGGGAGGCTACAGCTGGAGTATGGGGG
CCTACAAGTCATCTACAATATGCTATTGTCCAGAGAAAGGAACCTGGACAGAACTCGAAGGAGATGTAGC
AGAACCGTTGGCAGGCCCTGCCTGTGTGACAGTTATTCTGCCCTCTTGTGTACCATACAACAAATAA

Translation (628 aa):
MSRSGDRTSTFDPSHSDNLLHGLNLLWRKQLFCDVTLTAQGQQFHCHKAVLASCSQYFRSLFSSHPPLGG
GVGGQDGLGAPKDQQQPPQQQPSQQQQPPPQEEPGTPSSSPDDKLLTSPRAINNLVLQGCSSIGLRLVLE
YLYTANVTLSLDTVEEVLSVSKILHIPQVTKLCVQFLNDQISVQNYKQVCKIAALHGLEETKKLANKYLV
EDVLLLNFEEMRALLDSLPPPVESELALFQMSVLWLEHDRETRMQYAPDLMKRLRFALIPAPELVERVQS
VDFMRTDPVCQKLLLDAMNYHLMPFRQHCRQSLASRIRSNKKMLLLVGGLPPGPDRLPSNLVQYYDDEKK
TWKILTIMPYNSAHHCVVEVENFLFVLGGEDQWNPNGKHSTNFVSRYDPRFNSWIQLPPMQERRASFYAC
RLDKHLYVIGGRNETGYLSSVECYNLETNEWRYVSSLPQPLAAHAGAVHNGKIYISGGVHNGEYVPWLYC
YDPVMDVWARKQDMNTKRAIHTLAVMNDRLYAIGGNHLKGFSHLDVMLVECYDPKGDQWNILQTPILEGR
SGPGCAVLDDSIYLVGGYSWSMGAYKSSTICYCPEKGTWTELEGDVAEPLAGPACVTVILPSCVPYNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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