NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32771.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32771.2 Public Homo sapiens 17 NOTUM 24 110 108 CCDS HistoryNCBI Gene:147111Re-query CCDS DB by CCDS ID:32771.2Re-query CCDS DB by GeneID:147111See the combined annotation on chromosome 17 in Sequence Viewer

Public Note for CCDS 32771.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript, conservation and publication (PMID:18429952) data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32771.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409678.8 ENSP00000387310.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409678.8Link to Ensembl Protein Viewer:ENSP00000387310.3Re-query CCDS DB by Nucleotide ID:ENST00000409678Re-query CCDS DB by Protein ID:ENSP00000387310
Original member Current member NCBI NM_178493.6 NP_848588.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178493.6Link to Protein Sequence:NP_848588.3Re-query CCDS DB by Nucleotide ID:NM_178493Re-query CCDS DB by Protein ID:NP_848588Link to BLAST:NP_848588.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848588.3 496 Q6P988 496 100% 0 0

Chromosomal Locations for CCDS 32771.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81952961 81953267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81954256 81954303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81955397 81955544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81956650 81956750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81956883 81957074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81957806 81957908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81958335 81958393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81958935 81958995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81959471 81959566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81959640 81959692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81960587 81960909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGGCCGAGGGGTGCGCGTGCTGCTGCTGCTGAGCCTGCTGCACTGCGCCGGGGGCAGCGAGGGCAGGA
AGACCTGGCGGCGCCGGGGTCAGCAGCCGCCTCCTCCCCCGCGGACCGAGGCGGCGCCGGCGGCCGGACA
GCCCGTGGAGAGCTTCCCGCTGGACTTCACGGCCGTGGAGGGTAACATGGACAGCTTCATGGCGCAAGTC
AAGAGCCTGGCGCAGTCCCTGTACCCCTGCTCCGCGCAGCAGCTCAACGAGGACCTGCGCCTGCACCTCC
TACTCAACACCTCGGTGACCTGCAACGACGGCAGCCCCGCCGGCTACTACCTGAAGGAGTCCAGGGGCAG
CCGGCGGTGGCTCCTCTTCCTGGAAGGCGGCTGGTACTGCTTCAACCGCGAGAACTGCGACTCCAGATAC
GACACCATGCGGCGCCTCATGAGCTCCCGGGACTGGCCGCGCACTCGCACAGGCACAGGGATCCTGTCCT
CACAGCCGGAGGAGAACCCCTACTGGTGGAACGCAAACATGGTCTTCATCCCCTACTGCTCCAGTGATGT
TTGGAGCGGGGCTTCATCCAAGTCTGAGAAGAACGAGTACGCCTTCATGGGCGCCCTCATCATCCAGGAG
GTGGTGCGGGAGCTTCTGGGCAGAGGGCTGAGCGGGGCCAAGGTGCTGCTGCTGGCCGGGAGCAGCGCGG
GGGGCACCGGGGTGCTCCTGAATGTGGACCGTGTGGCTGAGCAGCTGGAGAAGCTGGGCTACCCAGCCAT
CCAGGTGCGAGGCCTGGCTGACTCCGGCTGGTTCCTGGACAACAAGCAGTATCGCCACACAGACTGCGTC
GACACGATCACGTGCGCGCCCACGGAGGCCATCCGCCGTGGCATCAGGTACTGGAACGGGGTGGTCCCGG
AGCGCTGCCGACGCCAGTTCCAGGAGGGCGAGGAGTGGAACTGCTTCTTTGGCTACAAGGTCTACCCGAC
CCTGCGCTGCCCTGTGTTCGTGGTGCAGTGGCTGTTTGACGAGGCACAGCTGACGGTGGACAACGTGCAC
CTGACGGGGCAGCCGGTGCAGGAGGGCCTGCGGCTGTACATCCAGAACCTCGGCCGCGAGCTGCGCCACA
CACTCAAGGACGTGCCGGCCAGCTTTGCCCCCGCCTGCCTCTCCCATGAGATCATCATCCGGAGCCACTG
GACGGATGTCCAGGTGAAGGGGACGTCGCTGCCCCGAGCACTGCACTGCTGGGACAGGAGCCTCCATGAC
AGCCACAAGGCCAGCAAGACCCCCCTCAAGGGCTGCCCCGTCCACCTGGTGGACAGCTGCCCCTGGCCCC
ACTGCAACCCCTCATGCCCCACCGTCCGAGACCAGTTCACGGGGCAAGAGATGAACGTGGCCCAGTTCCT
CATGCACATGGGCTTCGACATGCAGACGGTGGCCCAGCCGCAGGGACTGGAGCCCAGTGAGCTGCTGGGG
ATGCTGAGCAACGGAAGCTAG

Translation (496 aa):
MGRGVRVLLLLSLLHCAGGSEGRKTWRRRGQQPPPPPRTEAAPAAGQPVESFPLDFTAVEGNMDSFMAQV
KSLAQSLYPCSAQQLNEDLRLHLLLNTSVTCNDGSPAGYYLKESRGSRRWLLFLEGGWYCFNRENCDSRY
DTMRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSGASSKSEKNEYAFMGALIIQE
VVRELLGRGLSGAKVLLLAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRGLADSGWFLDNKQYRHTDCV
DTITCAPTEAIRRGIRYWNGVVPERCRRQFQEGEEWNCFFGYKVYPTLRCPVFVVQWLFDEAQLTVDNVH
LTGQPVQEGLRLYIQNLGRELRHTLKDVPASFAPACLSHEIIIRSHWTDVQVKGTSLPRALHCWDRSLHD
SHKASKTPLKGCPVHLVDSCPWPHCNPSCPTVRDQFTGQEMNVAQFLMHMGFDMQTVAQPQGLEPSELLG
MLSNGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH