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Report for CCDS32618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32618.1 Public Homo sapiens 17 ZNF830 24 110 108 CCDS HistoryNCBI Gene:91603Re-query CCDS DB by CCDS ID:32618.1Re-query CCDS DB by GeneID:91603See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32618.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361952.5 ENSP00000354518.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361952.5Link to Ensembl Protein Viewer:ENSP00000354518.3Re-query CCDS DB by Nucleotide ID:ENST00000361952Re-query CCDS DB by Protein ID:ENSP00000354518
Original member Current member NCBI NM_052857.4 NP_443089.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052857.4Link to Protein Sequence:NP_443089.3Re-query CCDS DB by Nucleotide ID:NM_052857Re-query CCDS DB by Protein ID:NP_443089Link to BLAST:NP_443089.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443089.3 372 Q96NB3 372 100% 0 0

Chromosomal Locations for CCDS 32618.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 34961567 34962685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGGCGTCCTCCGCCTCCGCCCGGACTCCGGCAGGGAAGCGAGTGATAAATCAGGAAGAATTGCGGCGGT
TAATGAAGGAGAAGCAGCGTCTGAGCACCAGTCGGAAACGGATAGAATCTCCATTCGCGAAGTACAACCG
TTTGGGGCAGCTGAGTTGTGCCCTGTGTAACACTCCGGTTAAGAGCGAGCTCCTGTGGCAGACTCACGTC
CTGGGAAAGCAGCACCGAGAGAAAGTGGCCGAGCTGAAAGGCGCGAAGGAAGCCAGCCAGGGTTCGTCCG
CCAGTTCAGCGCCTCATTCCGTCAAGAGGAAAGCGCCGGACGCAGACGACCAAGATGTCAAGAGAGCGAA
GGCCACCTTGGTGCCTCAGGTACAGCCCTCCACATCTGCGTGGACCACCAACTTTGACAAAATAGGAAAG
GAGTTCATTAGAGCGACTCCCAGTAAGCCTTCAGGACTCAGTTTACTCCCCGATTATGAAGATGAGGAGG
AGGAGGAAGAGGAGGAGGAAGGAGATGGAGAAAGAAAAAGGGGGGACGCCAGCAAGCCGCTCTCCGACGC
ACAGGGCAAGGAGCACTCAGTTTCCTCTTCACGGGAGGTAACAAGTAGTGTGCTGCCAAACGATTTCTTT
AGTACTAATCCTCCCAAGGCCCCCATAATTCCTCATTCAGGGTCAATTGAGAAAGCAGAAATACATGAAA
AAGTGGTGGAAAGGAGAGAAAACACCGCGGAAGCGTTACCGGAAGGTTTTTTTGACGACCCTGAGGTAGA
TGCAAGAGTACGAAAGGTTGATGCTCCAAAAGATCAGATGGACAAAGAGTGGGACGAATTCCAAAAAGCC
ATGAGGCAGGTCAACACTATTTCCGAAGCCATAGTTGCCGAAGAGGATGAGGAGGGACGGTTGGACCGCC
AGATTGGGGAGATCGATGAGCAGATAGAGTGTTACCGACGGGTGGAAAAGCTACGGAATCGCCAGGATGA
AATAAAAAATAAACTTAAAGAAATCCTGACCATAAAAGAACTGCAGAAAAAGGAAGAAGAGAATGCTGAC
AGCGATGATGAGGGGGAACTACAGGATTTGTTGTCTCAGGATTGGAGGGTGAAAGGGGCATTGTTATAG

Translation (372 aa):
MASSASARTPAGKRVINQEELRRLMKEKQRLSTSRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHV
LGKQHREKVAELKGAKEASQGSSASSAPHSVKRKAPDADDQDVKRAKATLVPQVQPSTSAWTTNFDKIGK
EFIRATPSKPSGLSLLPDYEDEEEEEEEEEGDGERKRGDASKPLSDAQGKEHSVSSSREVTSSVLPNDFF
STNPPKAPIIPHSGSIEKAEIHEKVVERRENTAEALPEGFFDDPEVDARVRKVDAPKDQMDKEWDEFQKA
MRQVNTISEAIVAEEDEEGRLDRQIGEIDEQIECYRRVEKLRNRQDEIKNKLKEILTIKELQKKEEENAD
SDDEGELQDLLSQDWRVKGALL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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