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Report for CCDS32415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32415.1 Public Homo sapiens 16 KATNIP 24 110 108 CCDS HistoryNCBI Gene:23247Re-query CCDS DB by CCDS ID:32415.1Re-query CCDS DB by GeneID:23247See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261588.10 ENSP00000261588.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261588.10Link to Ensembl Protein Viewer:ENSP00000261588.4Re-query CCDS DB by Nucleotide ID:ENST00000261588Re-query CCDS DB by Protein ID:ENSP00000261588
Original member Current member NCBI NM_015202.5 NP_056017.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015202.5Link to Protein Sequence:NP_056017.4Re-query CCDS DB by Nucleotide ID:NM_015202Re-query CCDS DB by Protein ID:NP_056017Link to BLAST:NP_056017.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056017.4 1618 O60303 1618 100% 0 0

Chromosomal Locations for CCDS 32415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 27550171 27550177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27573901 27573956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27618425 27618501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27628661 27628830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27631065 27631162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27648604 27648735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27677729 27677996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27681399 27681530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27698328 27698500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27699534 27699599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27701589 27701695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27703896 27703998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27708705 27708920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27721558 27721695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27740041 27740920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27749584 27750306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27751719 27751924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27754173 27754251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27761413 27761590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27766309 27766474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27769861 27770018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27771588 27771652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27773099 27773209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27774945 27775084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27776928 27777029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27777610 27777770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27777881 27777969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27778574 27778629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4857 nt):
ATGGACGGTCAGACTCTGCGAAAGGCCGAGAGAAGCTGGTCCTGCTCACGAGAGAAAAAGGAGGGTTACG
CTAAGGACATGGTGACAGACTTTGATGAGAAACATGATGAGTATTTAATATTGCTTCAGCAGAGGAACCG
GATATTAAAGCATTTGAAAAGCAAGGACCCCGTGCAATTGAGGCTGGAGCACTTGGAGCAAGGTTTCTCT
GTCTATGTCAACGGTGCCAATTCGGAGCTGAAATCATCACCGCGGAAAGCTATTCACTCTGACTTCTCCA
GAAGTGCCTCCCACACGGAGGGGACACACGATTATGGACGAAGAACTCTGTTTCGAGAAGCTGAAGAAGC
CTTAAGACGCAGTTCACGGACAGCCCCCAGTAAAGTCCAGCGCCGAGGATGGCACCAGAAATCTGTGCAG
ATCAGAACAGAAGCTGGCCCACGGCTCCACATCGAACCTCCTGTGGACTATTCTGATGATTTTGAGCTGT
GTGGGGATGTGACTCTCCAGGCAAACAACACTTCTGAGGATCGTCCGCAGGAGCTGAGAAGAAGCCTGGA
ACTTAGTGTAAATCTACAAAGGAAACAAAAGGATTGTTCCAGCGATGAGTATGACTCTATTGAGGAAGAC
ATACTCTCTGAGCCTGAGCCAGAGGACCCGGCACTGGTGGGCCATCCCAGACATGACCGCCCTCCTTCCA
GTGGCGACTGGACTCAGAAAGATGTTCACGGGGAACAGGAGACAGAAGGACGCTCTTCTCCAGGCCCAGA
CACCCTCGTGGTGCTGGAATTTAACCCAGCTTCCAAAAGTCATAAAAGGGAAAGGAATTTGTCTGCAAAG
CGGAAGGACAATGCTGAGGTTTTCGTTCCCACCAAACCTGAGCCAAACCTGACTCCCCAAGCTCCTGCTG
TATTCCCAGACCAGGAGAGGATGTGCTCCAGACCTGGAAGCCGGCGAGAGAGACCCCTGTCTGCAACCCG
CAAAACTCTTTGCGAGGCTGAGTACCCAGAGGAAGATGCCTCTGCTGTGCTCCAAGCCATCCAGGTGGAG
AACGCAGCCCTGCAGAGGGCGCTCCTCAGCAGAAAGGCCGAGCAGCCAGCCAGCCCACTGCAGGATGCAG
AAGGACCACCAGCAAAACCATGGACCAGTCTGCTGGAGGAGAAGGAAGAGACCCTTGAGCTGCTTCCCAT
CACCACGGCGACTACTACTCAGGAGCCGGCCGGGGCAGCAGGAGGAGCCAGGGCCATCAACCAGGCCATG
GACAGAATTGGGCTTCTGGGAAGCAGACAACAGCAGAAGCTTCTGAAAGTCCTCCAGGCCGTCGAAAGTG
ACTCTGCCCATCTCGGCAGGGTGGTTTCACCAACCAAGGAGCAAGTATCAGACACAGAGGACAAACAGAG
AATGAGGGCAGACGAGATCAAAGATGCCATCTACGTGACCATGGAGATCCTGTCCAACTGGGGCAACTCG
TGGTGGGTGGGTCTCACAGAAGTCGAGTTCTTTGACTTGAATGACACAAAGCTTTATGTGTCGCCCCACG
ATGTGGATATCCGGAACACAGCCACGCCTGGGGAGCTGGGCCGCCTCGTCAACAGGAACTTAGCTGGCAA
GAAAGACTCCTCCCCGTGGACCTGCCCCTTCCACCCACCACTCCAGCTGTTTTTTGTTATTCGAAACACA
AGACAGCTGGGGGACTTCCATCTGGCCAAGATCAAGGTTCGGAATTACTGGACAGCTGATGGCGATCTTG
ACATTGGTGCCAAGAACGTGAAGCTTTACGTCAACAGAAACCTCATCTTCAATGGCAAGTTAGACAAAGG
AGATAGGGAGGCCCCAGCTGACCACAGCATCCTGGTTGACCAGAAGAACGAGAAGAGCGAGCAACTAGAG
GAGGCCATGAACGCTCACTCGGAAGAAAGCAAAGGCACCCATGAGATGGCTGGTGCCAGCGGGGACAAGG
AGCTTGGTCTCGGTTGCTCACCGCCAGCTGAAACATTAGCGGATGCAAAGCTTTCTTCACAAGGAAATGT
GTCTGGCAAAAGAAAGAATTCTACTAATTGCAGGAAAGACAGTTTGTCCCAGTTAGAGGAATATTTGAGA
CTGTCGGCAGTCCCCACTTCGATGGGTGACATGCCCAGTGCTCCTGCCACTTCCCCACCTGTGAAGTGCC
CTCCTGTCCATGAGGAGCCCTCTCTCATCCAACAACTGGAAAACCTCATGGGCAGAAAAATCTGTGAGCC
ACCCGGGAAAACCCCATCCTGGTTACAACCTTCTCCCACCGGCAAGGACAGGAAGCAGGGAGGCAGGAAG
CCAAAACCCCTCTGGCTTAGTCCCGAGAAGCCCCTGGCCTGGAAGGGCAGGCTCCCATCAGACGATGTCA
TCGGTGAGGGTCCTGGAGAGACCGAGGCCAGGGATAAAGGCCTACGGCATGAGCCAGGGTGGGGGACCAG
CCGGAGTGTCAACACCAAGGAGAGACCCCAGAGGGCAACCACCAAAGTCCACAGTGATGACTCAGACATC
TTTAACCAGCCCCCCAACAGAGAGCGCCCTGCTAGTGGGAGGAGGGGCTCAAGGAAGGATGCTGGCAGCA
GTAGTCATGGGGACGACCAGCCAGCCAGCAGAGAAGACACCTGGTCTTCCAGGACGCCGTCACGGTCAAG
GTGGCGCAGTGAGCAGGAGCACACACTTCACGAGTCATGGAGCTCCCTCAGTGCCTTCGACCGCTCCCAC
CGGGGACGCATCTCCAACACGGAGCTCCCGGGGGACATCCTGGATGAGCTCCTGCAGCAAAAGAGCAGCC
GGCACAGCGACTTGCCCCCCTCCAAGAAGGGGGAGCAGCCAGGGCTGTCGAGAGGGCAGGATGGCTACTC
TGGAGAGACAGACGCTGGGGGTGACTTTAAAATCCCCGTCTTGCCTTATGGACAGCGCTTGGTCATTGAC
ATCAAGTCTACCTGGGGGGACAGACACTATGTCGGCCTCAACGGAATAGAAATATTCAGTTCCAAGGGTG
AACCGGTGCAGATTTCAAACATAAAAGCAGACCCTCCCGATATCAATATTTTACCAGCCTATGGGAAAGA
CCCCCGCGTGGTCACCAACCTCATCGACGGGGTGAACAGGACCCAGGATGACATGCATGTCTGGCTGGCC
CCCTTCACGCGGGGCAGATCCCACTCCATCACCATTGACTTCACGCACCCTTGCCACGTTGCCCTGATCA
GAATTTGGAACTACAATAAATCTCGGATACATTCCTTCCGAGGCGTGAAGGACATCACAATGCTGTTAGA
CACCCAGTGCATCTTTGAAGGAGAAATCGCCAAGGCCTCTGGAACCCTGGCGGGAGCCCCAGAGCACTTT
GGAGACACGATCTTATTCACAACCGATGATGACATTCTCGAGGCCATATTCTATTCTGATGAGATGTTTG
ACCTGGATGTGGGGAGCCTGGACAGCCTGCAGGATGAAGAGGCAATGAGGAGGCCCAGCACGGCCGACGG
CGAGGGGGATGAGCGGCCCTTCACCCAGGCTGGCTTGGGGGCTGATGAACGGATCCCGGAGCTAGAGCTC
CCATCCAGTTCCCCTGTCCCCCAAGTCACCACGCCAGAGCCAGGCATCTACCACGGAATCTGCCTTCAGC
TGAATTTCACTGCCTCCTGGGGAGACTTGCACTACCTGGGGCTCACTGGCCTGGAAGTGGTGGGCAAGGA
GGGCCAGGCGCTGCCCATCCACCTGCACCAGATCTCTGCTTCCCCCAGAGACTTAAATGAGCTCCCCGAG
TACTCTGACGACTCCCGGGCCCTGGACAAGTTAATTGATGGCACCAACATCACCATGGAGGATGAGCATA
TGTGGCTGATCCCCTTCTCGCCGGGGCTGGACCATGTGGTCACGATCCGCCTGGACAGGGCCGAAAGCAT
CGCAGGCCTGCGCTTCTGGAACTACAATAAATCTCCCGAGGACACCTATCGCGGGGCCAAGATTGTCCAC
GTCTCCCTGGATGGCCTGTGCGTCTCCCCGCCAGAGGGCTTTCTCATCCGGAAGGGGCCAGGCAACTGCC
ACTTTGATTTTGCTCAAGAAATCCTCTTCGTGGACTACCTACGGGCTCAGCTGCTGCCCCAGCCGGCCAG
GAGGCTGGACATGAGAAGCCTGGAGTGTGCAAGCATGGACTACGAGGCACCGCTGATGCCCTGTGGCTTC
ATTTTCCAGTTTCAGCTTCTCACCAGCTGGGGCGACCCCTACTACATCGGCCTCACCGGCCTGGAGCTGT
ATGACGAGCGAGGAGAAAAAATCCCCTTGTCGGAAAACAATATTGCGGCCTTCCCCGACAGCGTGAACTC
CCTGGAGGGTGTGGGCGGGGACGTCCGCACCCCAGACAAGCTCATCGACCAAGTGAACGACACCAGTGAT
GGCCGGCACATGTGGCTGGCTCCCATCCTGCCGGGCCTGGTGAACCGGGTTTATGTGATTTTCGATCTGC
CTACCACCGTGTCAATGATCAAACTGTGGAATTATGCGAAAACACCCCATCGAGGGGTGAAGGAGTTTGG
CCTCCTGGTGGACGACCTGCTTGTGTACAATGGGATCCTGGCCATGGTGAGCCACCTGGTGGGGGGCATC
CTGCCCACATGTGAGCCCACCGTGCCCTACCACACCATCCTCTTCACCGAGGACAGGGACATCCGCCACC
AGGAGAAACACACCACCATCAGTAATCAGGCCGAGGATCAAGATGTCCAGATGATGAATGAAAACCAAAT
CATTACCAACGCGAAACGGAAGCAGAGCGTTGTTGACCCAGCCTTACGTCCCAAAACCTGCATCAGCGAG
AAGGAGACGAGACGACGGCGCTGCTGA

Translation (1618 aa):
MDGQTLRKAERSWSCSREKKEGYAKDMVTDFDEKHDEYLILLQQRNRILKHLKSKDPVQLRLEHLEQGFS
VYVNGANSELKSSPRKAIHSDFSRSASHTEGTHDYGRRTLFREAEEALRRSSRTAPSKVQRRGWHQKSVQ
IRTEAGPRLHIEPPVDYSDDFELCGDVTLQANNTSEDRPQELRRSLELSVNLQRKQKDCSSDEYDSIEED
ILSEPEPEDPALVGHPRHDRPPSSGDWTQKDVHGEQETEGRSSPGPDTLVVLEFNPASKSHKRERNLSAK
RKDNAEVFVPTKPEPNLTPQAPAVFPDQERMCSRPGSRRERPLSATRKTLCEAEYPEEDASAVLQAIQVE
NAALQRALLSRKAEQPASPLQDAEGPPAKPWTSLLEEKEETLELLPITTATTTQEPAGAAGGARAINQAM
DRIGLLGSRQQQKLLKVLQAVESDSAHLGRVVSPTKEQVSDTEDKQRMRADEIKDAIYVTMEILSNWGNS
WWVGLTEVEFFDLNDTKLYVSPHDVDIRNTATPGELGRLVNRNLAGKKDSSPWTCPFHPPLQLFFVIRNT
RQLGDFHLAKIKVRNYWTADGDLDIGAKNVKLYVNRNLIFNGKLDKGDREAPADHSILVDQKNEKSEQLE
EAMNAHSEESKGTHEMAGASGDKELGLGCSPPAETLADAKLSSQGNVSGKRKNSTNCRKDSLSQLEEYLR
LSAVPTSMGDMPSAPATSPPVKCPPVHEEPSLIQQLENLMGRKICEPPGKTPSWLQPSPTGKDRKQGGRK
PKPLWLSPEKPLAWKGRLPSDDVIGEGPGETEARDKGLRHEPGWGTSRSVNTKERPQRATTKVHSDDSDI
FNQPPNRERPASGRRGSRKDAGSSSHGDDQPASREDTWSSRTPSRSRWRSEQEHTLHESWSSLSAFDRSH
RGRISNTELPGDILDELLQQKSSRHSDLPPSKKGEQPGLSRGQDGYSGETDAGGDFKIPVLPYGQRLVID
IKSTWGDRHYVGLNGIEIFSSKGEPVQISNIKADPPDINILPAYGKDPRVVTNLIDGVNRTQDDMHVWLA
PFTRGRSHSITIDFTHPCHVALIRIWNYNKSRIHSFRGVKDITMLLDTQCIFEGEIAKASGTLAGAPEHF
GDTILFTTDDDILEAIFYSDEMFDLDVGSLDSLQDEEAMRRPSTADGEGDERPFTQAGLGADERIPELEL
PSSSPVPQVTTPEPGIYHGICLQLNFTASWGDLHYLGLTGLEVVGKEGQALPIHLHQISASPRDLNELPE
YSDDSRALDKLIDGTNITMEDEHMWLIPFSPGLDHVVTIRLDRAESIAGLRFWNYNKSPEDTYRGAKIVH
VSLDGLCVSPPEGFLIRKGPGNCHFDFAQEILFVDYLRAQLLPQPARRLDMRSLECASMDYEAPLMPCGF
IFQFQLLTSWGDPYYIGLTGLELYDERGEKIPLSENNIAAFPDSVNSLEGVGGDVRTPDKLIDQVNDTSD
GRHMWLAPILPGLVNRVYVIFDLPTTVSMIKLWNYAKTPHRGVKEFGLLVDDLLVYNGILAMVSHLVGGI
LPTCEPTVPYHTILFTEDRDIRHQEKHTTISNQAEDQDVQMMNENQIITNAKRKQSVVDPALRPKTCISE
KETRRRRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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