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Report for CCDS32290.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32290.1 Public Homo sapiens 15 GOLGA6A 24 110 108 CCDS HistoryNCBI Gene:342096Re-query CCDS DB by CCDS ID:32290.1Re-query CCDS DB by GeneID:342096See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32290.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290438.3 ENSP00000290438.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000290438.3Link to Ensembl Protein Viewer:ENSP00000290438.3Re-query CCDS DB by Nucleotide ID:ENST00000290438Re-query CCDS DB by Protein ID:ENSP00000290438
Original member Current member NCBI NM_001038640.2 NP_001033729.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001038640.2Link to Protein Sequence:NP_001033729.2Re-query CCDS DB by Nucleotide ID:NM_001038640Re-query CCDS DB by Protein ID:NP_001033729Link to BLAST:NP_001033729.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001033729.2 693 Q9NYA3 693 100% 0 0

Chromosomal Locations for CCDS 32290.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74070910 74071037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74071124 74071277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74071367 74071470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74071554 74071656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74072218 74072309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74072742 74072817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74074148 74074216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74074493 74075001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74075403 74075490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74075683 74075790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74075899 74075985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74077018 74077124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74077221 74077302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74077403 74077453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74077715 74077753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74078609 74078689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74080616 74080735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74082426 74082509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2082 nt):
ATGTGGCCCCAACCCTACCTCCCTCCCCACCCCATGATGTTAGAAGAATCTCGACAGAATAAATTGGCAG
CAGCCAAGAAAAAGCTAAAAGAATATCAGCAAAGGAAGAGCCCTGGTATTCCAGCAGGAGCAAAGACAAA
AAAGAAAAAAACTGACAGTAGCCCTGAGACAACCACTTCCGGTGGTTGCCACTCACCTGGGGATAGCCAG
TACCAAGAACTAGCAGTAGCCCTGGAGTCAAGCTCAGTGACAATCAGTCAACTCAATGAAAACATAGAAT
CATTGAAACAGCAGAAGAAACAAGTGGAACATCAGCTGGAAGAAGCAAAGAAAACAAACAATGAAATACA
CAAAGCACAAATGGAGCGGTTAGAGACAATCAACATCCTCACATTGGAAAAGGCAGACTTGAAGACCACC
CTTTACCATACTAAACGTGCTGCCCGACACTTCGAAGAAGAGTCCAAGGATCTGGCTGGCCGCCTGCAAT
ACTCCTTACAGCGTATTCAAGAATTGGAGCGGGCTCTCTGTGCTGTGTCTACACAGCAGCAGGAAGAGGA
CAGGTCCTCGAGCTGCAGAGAAGCGGTCCTCCAGCGGTGGTTACAGCAGACCATAAAGGAGCGGGCGCTG
CTGAACGCACACGTGACACAGGTGACAGAGTCACTAAAACAAGTCCAGCTAGAGCGAGACGAATATGCTA
AACACATAAAAGGAGAGAGGGCCCGGTGGCAGGAGAGGATGTGGAAAATGTCGGTGGAGGCTCGAACATT
GAAGGAAGAGAAGAAGCGTGACATACATCGGATACAGGAGCTGGAGAGGAGCTTGTCCGAACTCAAAAAC
CAGATGGCTGAGCCCCCATCCCTGGCGCCCCCAGCAGTGACCTCTGTGGTGGAACAGCTACAAGATGAGG
CCAAACACCTGAGGCAGGAGGTGGAAGGTCTGGAGGGAAAGCTCCAGTCCCAGGTGGAAAACAATCAGGC
CTTGAGTCTCCTTAGCAAGGAACAAAAGCAGAGACTCCAGGAGCAGGAGGAGATGCTCCGAGAGCAGGAG
GCGCAGAGAGTGCGGGAGCAGGAGAGACTGTGTGAACAAAACGAGAGGCTTCGGGAGCAGCAGAAGACGC
TACAGGAGCAGGGTGAGAGGCTGCGAAAGCAGGAGCAGAGGCTACGCAAACAGGAGGAGAGGCTGCGAAA
GGAGGAGGAGAGGCTGCAAAAGCAGGAAAAGAGGCTGTGGGACCAGGAGGAGAGGCTGTGGAAGAAGGAG
GAGAGGCTACAAAAGCAGGAGGAGAGGCTCGCGCTCTCCCAGAACCACAAGCTCGACAAGCAGCTGGCCG
AGCCACAGTGCAGCTTCGAGGATCTGAACAACGAGAAAAAGAGCGCACTGCAGTTGGAGCAGCAAGTAAA
GGAGCTGCAGGAGAAGCTAGACGAGGAGCACCTAGAAGCTGCCAGCCACCAGAACCAACAGCTAGAGACC
CAGCTAAGCCTCGTGGCTCTCCCTGGAGAAGGAGATGGAGGACAACATCTGGACAGTGAGGAGGAGGAGG
CGCCTCGGCCCACGCCAAACATCCCAGAGGACCTGGAGAGCCGGGAGGCCACGAGCAGCTTTATGGACCT
CCCGAAGGAGAAGGCGGACGGGACGGAGCAGGTGGAGAGACGAGAGCTTGGATTCGTCCAGCCTTCTGGA
GTGACAGACGGCATGAGAGAGTCCTTCACCGTATATGAAAGCCAGGGGGCAGTGCCAAACACGCGGCACC
AGGAGATGGAGGATGTCATCAGGCTGGCCCAGAAGGAGGAGGAGATGAAGGTGAAGCTGCTGGAGCTGCA
AGAGTTGGTGTTGCCCCTTGTGGGCAACCATGAGGGGCATGGCAAATTCCTCATCGCTGCCCAGAACCCT
GCTGATGAGCCCACTCCAGGGGCCCCAGCCCCCCAGGAACTTGGGGCTGCCGGTGAGCAGGATGTTTTTT
ATGAAGTGAGCCTGGACAACAACGTGGAGCCTGCACCAGGAGCGGCCAGGGAGGGTTCTCCCCATGACAA
CCCCACTGTACAGCAGATCGTGCAGCTGTCTCCTGTCATGCAGGACACCTAG

Translation (693 aa):
MWPQPYLPPHPMMLEESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDSSPETTTSGGCHSPGDSQ
YQELAVALESSSVTISQLNENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMERLETINILTLEKADLKTT
LYHTKRAARHFEEESKDLAGRLQYSLQRIQELERALCAVSTQQQEEDRSSSCREAVLQRWLQQTIKERAL
LNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLSELKN
QMAEPPSLAPPAVTSVVEQLQDEAKHLRQEVEGLEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQE
AQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKE
ERLQKQEERLALSQNHKLDKQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASHQNQQLET
QLSLVALPGEGDGGQHLDSEEEEAPRPTPNIPEDLESREATSSFMDLPKEKADGTEQVERRELGFVQPSG
VTDGMRESFTVYESQGAVPNTRHQEMEDVIRLAQKEEEMKVKLLELQELVLPLVGNHEGHGKFLIAAQNP
ADEPTPGAPAPQELGAAGEQDVFYEVSLDNNVEPAPGAAREGSPHDNPTVQQIVQLSPVMQDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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