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Report for CCDS32213.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32213.1 Public Homo sapiens 15 TGM7 24 110 108 CCDS HistoryNCBI Gene:116179Re-query CCDS DB by CCDS ID:32213.1Re-query CCDS DB by GeneID:116179See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32213.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000452443.3 ENSP00000389466.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000452443.3Link to Ensembl Protein Viewer:ENSP00000389466.2Re-query CCDS DB by Nucleotide ID:ENST00000452443Re-query CCDS DB by Protein ID:ENSP00000389466
Original member Current member NCBI NM_052955.3 NP_443187.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052955.3Link to Protein Sequence:NP_443187.1Re-query CCDS DB by Nucleotide ID:NM_052955Re-query CCDS DB by Protein ID:NP_443187Link to BLAST:NP_443187.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443187.1 710 Q96PF1 710 100% 0 0

Chromosomal Locations for CCDS 32213.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43276455 43276614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43276862 43276995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43279117 43279277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43279625 43279951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43281844 43282086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43282517 43282620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43284814 43284952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43287280 43287457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43287541 43287669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43291979 43292097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43292709 43292954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43293449 43293631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43302241 43302250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2133 nt):
ATGGATCAGGTGGCAACCTTGCGGCTTGAGTCTGTCGACCTGCAGAGCTCCAGGAACAACAAGGAGCACC
ACACGCAGGAGATGGGCGTCAAGCGGCTCACTGTGCGCCGCGGCCAGCCCTTCTACCTCCGGCTGAGCTT
CAGCCGACCCTTCCAGTCCCAGAACGACCACATCACCTTTGTGGCTGAGACCGGACCCAAGCCGTCAGAG
CTGCTGGGGACCCGAGCCACATTCTTCCTCACCCGGGTCCAGCCCGGGAATGTCTGGAGCGCTTCTGATT
TCACCATTGACTCCAACTCTCTCCAAGTTTCCCTTTTCACACCAGCCAATGCAGTTATTGGCCATTACAC
TCTGAAAATAGAGATCTCTCAGGGCCAAGGTCACAGTGTGACTTACCCGCTGGGAACTTTCATCCTACTT
TTTAACCCTTGGAGTCCAGAGGACGACGTCTACCTGCCAAGTGAAATACTGCTGCAGGAGTATATCATGC
GAGATTATGGCTTTGTTTACAAGGGTCATGAAAGATTCATCACCTCCTGGCCCTGGAACTACGGGCAGTT
TGAAGAGGACATCATAGACATCTGCTTTGAGATCCTGAACAAGAGCCTGTATCACTTAAAGAACCCGGCC
AAAGACTGTTCCCAGCGGAACGACGTGGTGTATGTGTGCAGGGTGGTGAGTGCCATGATCAACAGCAACG
ATGACAATGGCGTGCTGCAGGGGAACTGGGGCGAGGACTACTCCAAAGGGGTCAGTCCTCTGGAGTGGAA
GGGCAGTGTGGCCATCCTACAGCAGTGGTCAGCCAGGGGCGGGCAGCCTGTGAAGTACGGACAGTGCTGG
GTCTTCGCCTCTGTTATGTGCACCGTAATGAGATGCTTAGGTGTTCCAACCCGTGTTGTTTCCAATTTCC
GTTCCGCGCACAACGTGGATAGGAACTTGACCATCGATACGTACTATGACCGAAATGCCGAGATGCTGTC
AACTCAGAAACGAGACAAAATATGGAACTTCCACGTCTGGAATGAGTGCTGGATGATCCGGAAAGATCTC
CCACCAGGATACAACGGGTGGCAGGTTCTGGACCCCACTCCCCAGCAGACCAGCAGTGGGCTGTTCTGCT
GTGGCCCTGCCTCTGTGAAGGCCATCAGGGAAGGGGATGTCCACCTGGCCTATGACACCCCTTTTGTGTA
TGCCGAGGTGAACGCCGATGAAGTCATTTGGCTCCTTGGGGATGGCCAGGCCCAGGAAATCCTGGCCCAC
AACACCAGTTCCATCGGGAAGGAGATCAGCACTAAGATGGTGGGGTCAGACCAGCGCCAGAGCATCACCA
GCTCCTACAAGTACCCAGAAGGATCCCCTGAGGAGAGAGCTGTCTTCATGAAGGCTTCTCGGAAAATGCT
GGGCCCCCAAAGAGCTTCTTTGCCCTTCCTGGATCTCCTGGAGTCTGGGGGTCTTAGGGATCAGCCAGCG
CAGCTGCAGCTTCACCTGGCCAGGATACCCGAGTGGGGCCAGGACCTGCAGCTGCTGCTGCGTATCCAGA
GGGTGCCAGACAGCACCCACCCTCGGGGGCCCATCGGACTGGTGGTGCGCTTCTGTGCACAGGCCCTGCT
GCATGGGGGTGGTACCCAGAAGCCCTTCTGGAGGCACACAGTGCGGATGAACCTGGACTTTGGGAAGGAG
ACACAGTGGCCGCTCCTCCTGCCCTACAGCAATTACAGAAACAAGCTAACGGACGAAAAGCTCATCCGCG
TGTCTGGCATCGCGGAGGTTGAAGAGACAGGGAGGTCCATGCTGGTCCTAAAAGATATCTGTCTGGAGCC
TCCCCACTTGTCTATTGAGGTGTCTGAGAGGGCTGAGGTGGGCAAGGCGCTGAGAGTCCATGTCACCCTC
ACCAACACCTTAATGGTGGCTCTGAGCAGCTGCACGATGGTGCTGGAAGGAAGCGGCCTCATCAATGGGC
AGATAGCAAAGGACCTTGGGACTCTGGTGGCCGGACACACCCTCCAAATTCAACTGGACCTCTACCCGAC
CAAAGCTGGACCCCGCCAGCTCCAGGTTCTCATCAGCAGCAACGAGGTCAAGGAGATCAAAGGCTACAAG
GACATCTTCGTCACTGTGGCTGGGGCTCCCTGA

Translation (710 aa):
MDQVATLRLESVDLQSSRNNKEHHTQEMGVKRLTVRRGQPFYLRLSFSRPFQSQNDHITFVAETGPKPSE
LLGTRATFFLTRVQPGNVWSASDFTIDSNSLQVSLFTPANAVIGHYTLKIEISQGQGHSVTYPLGTFILL
FNPWSPEDDVYLPSEILLQEYIMRDYGFVYKGHERFITSWPWNYGQFEEDIIDICFEILNKSLYHLKNPA
KDCSQRNDVVYVCRVVSAMINSNDDNGVLQGNWGEDYSKGVSPLEWKGSVAILQQWSARGGQPVKYGQCW
VFASVMCTVMRCLGVPTRVVSNFRSAHNVDRNLTIDTYYDRNAEMLSTQKRDKIWNFHVWNECWMIRKDL
PPGYNGWQVLDPTPQQTSSGLFCCGPASVKAIREGDVHLAYDTPFVYAEVNADEVIWLLGDGQAQEILAH
NTSSIGKEISTKMVGSDQRQSITSSYKYPEGSPEERAVFMKASRKMLGPQRASLPFLDLLESGGLRDQPA
QLQLHLARIPEWGQDLQLLLRIQRVPDSTHPRGPIGLVVRFCAQALLHGGGTQKPFWRHTVRMNLDFGKE
TQWPLLLPYSNYRNKLTDEKLIRVSGIAEVEETGRSMLVLKDICLEPPHLSIEVSERAEVGKALRVHVTL
TNTLMVALSSCTMVLEGSGLINGQIAKDLGTLVAGHTLQIQLDLYPTKAGPRQLQVLISSNEVKEIKGYK
DIFVTVAGAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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