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Report for CCDS32125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32125.1 Public Homo sapiens 14 TMED8 24 110 108 CCDS HistoryNCBI Gene:283578Re-query CCDS DB by CCDS ID:32125.1Re-query CCDS DB by GeneID:283578See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32125.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216468.8 ENSP00000216468.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216468.8Link to Ensembl Protein Viewer:ENSP00000216468.7Re-query CCDS DB by Nucleotide ID:ENST00000216468Re-query CCDS DB by Protein ID:ENSP00000216468
Original member Current member NCBI NM_213601.3 NP_998766.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_213601.3Link to Protein Sequence:NP_998766.1Re-query CCDS DB by Nucleotide ID:NM_213601Re-query CCDS DB by Protein ID:NP_998766Link to BLAST:NP_998766.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_998766.1 325 Q6PL24 325 100% 0 0

Chromosomal Locations for CCDS 32125.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77341771 77341988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77343178 77343483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77343697 77343823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77346349 77346478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77351673 77351751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77376936 77377053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGTCTGACCTGCAGGCGGCTGAGGGGCCGGGCTCCTGGAGCCCCACAGCCCGCCCAGGGTCGGCTGGCG
GCGTCGGGGACTGCCAGGGAGTGGAGGGGAGCCAGGCGGCCGCCTCAGAGAATGAAGATCTAGAAAACAA
GGATACCTCTTTATTGGCTTCTGCCACCGATCCAGAACCCTGCTCCTCACCCCACAGGCCACAGATGGTA
TCTCCAGTGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGG
TGAAACAGGATTTGCTGCCTGCAGACCAGGCCCAGGTCCTCAATGAGATGGCTAAGTATCAAGTTCCACA
GAGGTCTGGGGACATCGTTATGATCCAGTCTGAACATACAGGAGCTATAGATGTTCTTTCAGCTGATTTG
GAATCTGCAGATCTTCTGGGGGACCACAGGAAAGTCTCCCCACCTCTGATGGCTCCTCCATGCATCTGGA
CCTTTGCCAAGGTGAAGGAATTCAAAAGCAAGCTGGGCAAAGAGAAGAACAGCCGTCTGGTGGTGAAGCG
TGGTGAGGTGGTGACCATCCGGGTACCTACTCATCCAGAGGGGAAGCGTGTCTGCTGGGAGTTTGCGACC
GATGACTATGACATTGGCTTTGGAGTTTATTTTGACTGGACCCCTGTAACTAGCACTGACATAACTGTGC
AGGTCAGTGATTCCAGTGACGATGAGGATGAAGAAGAGGAAGAGGAGGAAGAGATTGAAGAACCCGTTCC
AGCTGGAGATGTGGAGAGAGGCTCCAGGAGCTCCTTGCGGGGTCGCTATGGGGAGGTCATGCCTGTGTAC
CGGCGGGACAGCCACCGAGACGTGCAGGCTGGCAGCCATGACTACCCTGGTGAGGGCATCTACCTGCTCA
AGTTCGACAACTCCTACTCCCTGCTGCGCAACAAGACTCTCTACTTCCACATCTACTACACCAGCTGA

Translation (325 aa):
MSDLQAAEGPGSWSPTARPGSAGGVGDCQGVEGSQAAASENEDLENKDTSLLASATDPEPCSSPHRPQMV
SPVSKDATEDLRKATGPLEAQALVKQDLLPADQAQVLNEMAKYQVPQRSGDIVMIQSEHTGAIDVLSADL
ESADLLGDHRKVSPPLMAPPCIWTFAKVKEFKSKLGKEKNSRLVVKRGEVVTIRVPTHPEGKRVCWEFAT
DDYDIGFGVYFDWTPVTSTDITVQVSDSSDDEDEEEEEEEEIEEPVPAGDVERGSRSSLRGRYGEVMPVY
RRDSHRDVQAGSHDYPGEGIYLLKFDNSYSLLRNKTLYFHIYYTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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