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Report for CCDS32113.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32113.1 Public Homo sapiens 14 RBM25 24 110 108 CCDS HistoryNCBI Gene:58517Re-query CCDS DB by CCDS ID:32113.1Re-query CCDS DB by GeneID:58517See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32113.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261973.12 ENSP00000261973.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261973.12Link to Ensembl Protein Viewer:ENSP00000261973.7Re-query CCDS DB by Nucleotide ID:ENST00000261973Re-query CCDS DB by Protein ID:ENSP00000261973
Original member Current member EBI ENST00000527432.5 ENSP00000431150.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527432.5Link to Ensembl Protein Viewer:ENSP00000431150.1Re-query CCDS DB by Nucleotide ID:ENST00000527432Re-query CCDS DB by Protein ID:ENSP00000431150
Original member Current member NCBI NM_021239.3 NP_067062.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021239.3Link to Protein Sequence:NP_067062.1Re-query CCDS DB by Nucleotide ID:NM_021239Re-query CCDS DB by Protein ID:NP_067062Link to BLAST:NP_067062.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067062.1 843 P49756-1 843 100% 0 0

Chromosomal Locations for CCDS 32113.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 73071642 73071747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73076319 73076368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73077369 73077536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73083494 73083551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73088001 73088161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73096915 73097100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73099380 73099433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73099667 73099750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73103192 73103478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73105859 73106081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73106196 73106285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73107826 73107899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73109342 73109492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73110831 73111155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73111528 73111802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73112152 73112250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73114286 73114333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73119713 73119805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2532 nt):
ATGTCTTTTCCACCTCATTTGAATCGCCCTCCCATGGGAATCCCAGCACTCCCACCAGGGATCCCACCCC
CGCAGTTTCCAGGATTTCCTCCACCTGTACCTCCAGGGACCCCAATGATTCCTGTACCAATGAGCATTAT
GGCTCCTGCTCCAACTGTCTTAGTACCCACTGTGTCTATGGTTGGAAAGCATTTGGGCGCAAGAAAGGAT
CATCCAGGCTTAAAGGCTAAAGAAAATGATGAAAATTGTGGTCCTACTACCACTGTTTTTGTTGGCAACA
TTTCCGAGAAAGCTTCAGACATGCTTATAAGACAACTCTTAGCTAAATGTGGTTTGGTTTTGAGCTGGAA
GAGAGTACAAGGTGCTTCCGGAAAGCTTCAAGCCTTCGGATTCTGTGAGTACAAGGAGCCAGAATCTACC
CTCCGTGCACTCAGATTATTACATGACCTGCAAATTGGAGAGAAAAAGCTACTCGTTAAAGTTGATGCAA
AGACAAAGGCACAGCTGGATGAATGGAAAGCAAAGAAGAAAGCTTCTAATGGGAATGCAAGGCCAGAAAC
TGTCACTAATGACGATGAAGAAGCCTTGGATGAAGAAACAAAGAGGAGAGATCAGATGATTAAAGGGGCT
ATTGAAGTTTTAATTCGTGAATACTCCAGTGAGCTAAATGCCCCCTCACAGGAATCTGATTCTCACCCCA
GGAAGAAGAAGAAGGAAAAGAAGGAGGACATTTTCCGCAGATTTCCAGTGGCCCCACTGATCCCTTATCC
ACTCATCACTAAGGAGGATATAAATGCTATAGAAATGGAAGAAGACAAAAGAGACCTGATATCTCGAGAG
ATCAGCAAATTCAGAGACACACATAAGAAACTGGAAGAAGAGAAAGGCAAAAAGGAAAAAGAAAGACAGG
AAATTGAGAAAGAACGGAGAGAAAGAGAGAGGGAGCGTGAAAGGGAACGAGAAAGGCGAGAACGGGAACG
AGAAAGGGAAAGAGAACGTGAACGAGAAAAGGAGAAAGAACGGGAGCGGGAACGAGAACGGGATAGGGAC
CGTGACCGGACAAAAGAGAGAGACCGAGATCGGGATCGAGAGAGAGATCGTGACCGGGATAGAGAAAGGA
GCTCAGATCGTAATAAGGATCGCAGTCGATCAAGAGAAAAAAGCAGAGATCGTGAAAGGGAACGAGAGCG
GGAAAGAGAGAGAGAGAGAGAACGAGAGCGAGAACGAGAACGGGAGCGAGAGAGAGAGCGAGAGAGGGAA
CGGGAGCGAGAAAGAGAAAAAGACAAAAAACGGGACCGAGAAGAAGATGAAGAAGATGCATACGAACGAA
GAAAACTTGAAAGAAAACTCCGAGAGAAAGAAGCTGCTTATCAAGAGCGCCTTAAGAATTGGGAAATCAG
AGAACGAAAGAAAACCCGGGAATATGAGAAAGAAGCTGAAAGAGAAGAAGAAAGAAGAAGAGAAATGGCC
AAAGAAGCTAAACGACTAAAAGAATTCTTAGAAGACTATGATGATGATAGAGATGACCCCAAATATTACA
GAGGAAGTGCTCTTCAGAAAAGGTTGCGTGATAGAGAAAAGGAAATGGAAGCAGATGAACGAGATAGGAA
GAGAGAGAAGGAGGAGCTTGAGGAAATCAGGCAGCGCCTTCTGGCAGAAGGGCATCCAGATCCAGATGCA
GAGCTCCAGAGGATGGAACAAGAGGCTGAGAGGCGCAGGCAGCCACAAATAAAGCAAGAGCCAGAATCAG
AAGAGGAGGAAGAAGAAAAGCAAGAAAAAGAAGAAAAACGAGAAGAACCCATGGAAGAGGAAGAGGAGCC
AGAGCAAAAGCCTTGTCTGAAACCTACTCTGAGGCCCATCAGCTCTGCTCCATCTGTTTCCTCTGCCAGT
GGCAATGCAACACCTAACACTCCTGGGGATGAGTCTCCCTGTGGTATTATTATTCCTCATGAAAACTCAC
CAGATCAACAGCAACCTGAGGAGCATAGGCCAAAAATAGGACTAAGTCTTAAACTGGGTGCTTCCAATAG
TCCTGGTCAGCCTAATTCTGTGAAGAGAAAGAAACTACCTGTAGATAGTGTCTTTAACAAATTTGAGGAT
GAAGACAGTGATGACGTACCCCGAAAAAGGAAACTGGTTCCCTTGGATTATGGTGAAGATGATAAAAATG
CAACCAAAGGCACTGTAAACACTGAAGAAAAGCGTAAACACATTAAGAGTCTCATTGAGAAAATCCCTAC
AGCCAAACCTGAGCTCTTCGCTTATCCCCTGGATTGGTCTATTGTGGATTCTATACTGATGGAACGTCGA
ATTAGACCATGGATTAATAAGAAAATCATAGAATATATAGGTGAAGAAGAAGCTACATTAGTTGATTTTG
TTTGTTCTAAGGTTATGGCTCATAGTTCACCCCAGAGCATTTTAGATGATGTTGCCATGGTACTTGATGA
AGAAGCAGAAGTTTTTATAGTCAAAATGTGGAGATTATTGATATATGAAACAGAAGCCAAGAAAATTGGT
CTTGTGAAGTAA

Translation (843 aa):
MSFPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVGKHLGARKD
HPGLKAKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPEST
LRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGA
IEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISRE
ISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRD
RDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERE
REREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMA
KEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDA
ELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSAS
GNATPNTPGDESPCGIIIPHENSPDQQQPEEHRPKIGLSLKLGASNSPGQPNSVKRKKLPVDSVFNKFED
EDSDDVPRKRKLVPLDYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERR
IRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIG
LVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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