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Report for CCDS32045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32045.1 Public Homo sapiens 14 SALL2 24 110 108 CCDS HistoryNCBI Gene:6297Re-query CCDS DB by CCDS ID:32045.1Re-query CCDS DB by GeneID:6297See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614342.1 ENSP00000483562.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614342.1Link to Ensembl Protein Viewer:ENSP00000483562.1Re-query CCDS DB by Nucleotide ID:ENST00000614342Re-query CCDS DB by Protein ID:ENSP00000483562
Original member Current member NCBI NM_005407.3 NP_005398.2 Accepted alive Link to Nucleotide Sequence:NM_005407.3Link to Protein Sequence:NP_005398.2Re-query CCDS DB by Nucleotide ID:NM_005407Re-query CCDS DB by Protein ID:NP_005398Link to BLAST:NP_005398.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005398.2 1007 Q9Y467-1 1007 100% 0 0

Chromosomal Locations for CCDS 32045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21522704 21525654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21536849 21536921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3024 nt):
ATGTCTCGGCGAAAGCAGCGGAAACCCCAACAGTTAATCTCGGACTGCGAAGGTCCCAGCGCGTCTGAGA
ACGGTGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAAC
TGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGGGGCCAGGAG
AACCCCAACAACTCTTCGGCCTCCTCTGAACCCCGGCCTGAGGGTCACAATAATCCTCAGGTCATGGACA
CAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGAGGAG
AGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGGTACAGCGGCTGGGGGAGGCGGGGGCCTG
ATCTTGGCCAGTCCCAAGCTGGGAGCAACCCCATTACCTCCAGAATCGACCCCTGCACCCCCTCCTCCTC
CACCACCCCCTCCGCCCCCAGGGGTAGGCAGTGGCCACTTGAATATCCCCCTGATCTTGGAAGAGCTACG
GGTGCTGCAGCAGCGGCAGATCCATCAGATGCAGATGACTGAGCAAATCTGCAGGCAGGTGCTGTTGCTT
GGCTCCTTAGGCCAGACGGTGGGTGCCCCTGCCAGTCCCTCAGAGCTACCTGGGACAGGGACTGCCTCTT
CCACCAAGCCCCTACTACCCCTCTTCAGCCCCATCAAGCCTGTCCAAACCAGCAAGACACTGGCATCTTC
CTCCTCCTCCTCCTCTTCCTCTTCAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCTTTACCACCCA
CTGGGGTCACAGCATCCTTTCTCTGCTGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTGCCCCTTCCC
CAGCCTTGCCAGGCAGCACAGATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACGGGACT
ACTGGCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCA
AAGAATGGAAGTGGTGAGCTGAGCTACGGAGAAGTGATGGGTCCCTTGGAGAAGCCTGGTGGAAGGCACA
AATGCCGCTTCTGTGCCAAAGTATTTGGCAGTGACAGTGCCCTGCAGATCCACCTTCGTTCCCACACGGG
TGAGAGGCCCTATAAGTGCAATGTCTGTGGAAACCGTTTTACCACCCGTGGCAACCTCAAAGTGCATTTC
CACCGGCATCGTGAGAAGTACCCACATGTGCAGATGAACCCACACCCAGTACCAGAGCACCTAGACTATG
TCATTACCAGCAGTGGCTTGCCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAGGAGGCAGCCAC
TCCAGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTCCACAACAGCACTCAGTGCCACAGAGAGCCTG
ACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAGGACTCCCTGCTTTCAATAAGTTTGTGCTCA
TGAAAGCAGTGGAACCCAAGAATAAAGCTGATGAAAACACCCCCCCAGGGAGTGAGGGCTCAGCCATCAG
TGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGTGACTTCACTACCAAGCTGG
GCACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTTCCCCTTCCCCTATGTGCTAGAGCCCTTGGGGG
CCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGGTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGT
GACCTCAGCTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCACCTTCATCCTCAGCCTCTTCTGGACCT
AACCAGTGTGTCATCTGTCTCCGAGTGCTTAGCTGTCCTCGGGCCCTACGCCTTCATTATGGCCAACATG
GAGGTGAGAGGCCCTTCAAATGCAAAGTGTGTGGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTGCACA
TTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCCATCTGCCAGAAGAAGTTC
ACCAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCACCTGGGGGGCCAGATCCCCAACGGTGGTACTG
CACTCCCTGAAGGTGGAGGAGCTGCTCAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGGGCACGGAG
TTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGAGGAGTTGTCTGAGGAGGAGGAAGAGGAGGAT
GAGGAAGAAGAGGAAGATGTGACTGATGAAGATTCCCTGGCAGGGAGAGGCTCAGAGAGTGGAGGTGAGA
AGGCAATATCAGTGAGAGGTGATTCAGAAGAGGCATCTGGGGCAGAGGAGGAGGTGGGGACAGTGGCGGC
AGCAGCCACAGCTGGGAAGGAGATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCA
CCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAGGCAAGG
AAGAGGGGGGCAAACCGGAGAGAAGCTCAAGTCCGGCATCAGCACTCACCCCAGAAGGGGAAGCCACCAG
CGTGACCTTGGTAGAGGAGCTGAGCCTGCAGGAGGCAATGAGAAAGGAGCCAGGAGAGAGCAGCAGCAGA
AAGGCCTGCGAAGTGTGTGGCCAGGCCTTTCCCTCCCAGGCAGCTCTGGAGGAGCATCAGAAGACCCACC
CCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAA
GCATATGCTCCTGGCACACCACCAGGTACAGCCCTTTGCCCCCCATGGCCCTCAGAATATTGCTGCTCTT
TCTCTAGTCCCTGGCTGTTCGCCTTCCATCACCTCCACAGGGCTCTCCCCCTTTCCCCGAAAAGATGACC
CCACGATCCCATGA

Translation (1007 aa):
MSRRKQRKPQQLISDCEGPSASENGDASEEDHPQVCAKCCAQFTDPTEFLAHQNACSTDPPVMVIIGGQE
NPNNSSASSEPRPEGHNNPQVMDTEHSNPPDSGSSVPTDPTWGPERRGEESSGHFLVAATGTAAGGGGGL
ILASPKLGATPLPPESTPAPPPPPPPPPPPGVGSGHLNIPLILEELRVLQQRQIHQMQMTEQICRQVLLL
GSLGQTVGAPASPSELPGTGTASSTKPLLPLFSPIKPVQTSKTLASSSSSSSSSSGAETPKQAFFHLYHP
LGSQHPFSAGGVGRSHKPTPAPSPALPGSTDQLIASPHLAFPSTTGLLAAQCLGAARGLEATASPGLLKP
KNGSGELSYGEVMGPLEKPGGRHKCRFCAKVFGSDSALQIHLRSHTGERPYKCNVCGNRFTTRGNLKVHF
HRHREKYPHVQMNPHPVPEHLDYVITSSGLPYGMSVPPEKAEEEAATPGGGVERKPLVASTTALSATESL
TLLSTSAGTATAPGLPAFNKFVLMKAVEPKNKADENTPPGSEGSAISGVAESSTATRMQLSKLVTSLPSW
ALLTNHFKSTGSFPFPYVLEPLGASPSETSKLQQLVEKIDRQGAVAVTSAASGAPTTSAPAPSSSASSGP
NQCVICLRVLSCPRALRLHYGQHGGERPFKCKVCGRAFSTRGNLRAHFVGHKASPAARAQNSCPICQKKF
TNAVTLQQHVRMHLGGQIPNGGTALPEGGGAAQENGSEQSTVSGARSFPQQQSQQPSPEEELSEEEEEED
EEEEEDVTDEDSLAGRGSESGGEKAISVRGDSEEASGAEEEVGTVAAAATAGKEMDSNEKTTQQSSLPPP
PPPDSLDQPQPMEQGSSGVLGGKEEGGKPERSSSPASALTPEGEATSVTLVEELSLQEAMRKEPGESSSR
KACEVCGQAFPSQAALEEHQKTHPKEGPLFTCVFCRQGFLERATLKKHMLLAHHQVQPFAPHGPQNIAAL
SLVPGCSPSITSTGLSPFPRKDDPTIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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