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Report for CCDS31528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31528.1 Public Homo sapiens 11 OR8K1 24 110 108 CCDS HistoryNCBI Gene:390157Re-query CCDS DB by CCDS ID:31528.1Re-query CCDS DB by GeneID:390157See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279783.5 ENSP00000279783.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279783.5Link to Ensembl Protein Viewer:ENSP00000279783.2Re-query CCDS DB by Nucleotide ID:ENST00000279783Re-query CCDS DB by Protein ID:ENSP00000279783
Original member Current member NCBI NM_001002907.1 NP_001002907.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002907.1Link to Protein Sequence:NP_001002907.1Re-query CCDS DB by Nucleotide ID:NM_001002907Re-query CCDS DB by Protein ID:NP_001002907Link to BLAST:NP_001002907.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002907.1 319 Q8NGG5 319 100% 0 0

Chromosomal Locations for CCDS 31528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56346039 56346998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGAATCATGTGGTAAAACACAATCACACGGCAGTGACCAAGGTGACTGAATTTATTCTCATGGGGATTA
CAGACAACCCTGGGCTGCAGGCTCCACTGTTTGGACTCTTCCTCATCATATATCTGGTCACAGTGATAGG
CAATCTGGGCATGGTTATCTTGACCTACTTGGACTCCAAGCTACACACCCCCATGTACTTTTTCCTTAGA
CATTTGTCAATCACTGATCTTGGTTACTCCACTGTCATTGCCCCGAAGATGTTAGTAAACTTCATAGTGC
ACAAAAACACAATTTCTTACAATTGGTATGCCACTCAGCTAGCATTCTTTGAGATTTTCATCATCTCTGA
GCTCTTTATTCTATCAGCAATGGCCTATGATCGCTACGTAGCCATCTGTAAACCTCTTCTGTACGTGATC
ATCATGGCAGAGAAAGTACTTTGGGTGCTGGTAATTGTTCCCTATCTCTATAGCACGTTTGTGTCACTAT
TTCTCACAATTAAGTTATTTAAACTGTCCTTCTGTGGCTCAAACATAATCAGCTATTTTTACTGTGACTG
TATCCCTCTGATGTCCATACTCTGTTCTGACACAAATGAATTAGAATTAATAATTTTGATCTTCTCAGGC
TGTAATTTGCTCTTCTCCCTCTCAATTGTTCTCATATCCTACATGTTTATTCTAGTGGCCATTCTCAGAA
TGAACTCAAGGAAAGGGAGGTACAAAGCCTTCTCCACCTGTAGCTCTCATCTGACAGTGGTGATCATGTT
CTATGGGACATTGTTATTTATTTACTTGCAACCCAAGTCCAGTCATACTTTGGCTATTGATAAAATGGCC
TCAGTGTTTTATACCCTGTTGATTCCTATGCTGAATCCGTTGATCTACAGCCTAAGGAACAAAGAAGTAA
AAGATGCTCTAAAGAGAACTTTAACCAATCGATTCAAAATTCCCATTTAA

Translation (319 aa):
MNHVVKHNHTAVTKVTEFILMGITDNPGLQAPLFGLFLIIYLVTVIGNLGMVILTYLDSKLHTPMYFFLR
HLSITDLGYSTVIAPKMLVNFIVHKNTISYNWYATQLAFFEIFIISELFILSAMAYDRYVAICKPLLYVI
IMAEKVLWVLVIVPYLYSTFVSLFLTIKLFKLSFCGSNIISYFYCDCIPLMSILCSDTNELELIILIFSG
CNLLFSLSIVLISYMFILVAILRMNSRKGRYKAFSTCSSHLTVVIMFYGTLLFIYLQPKSSHTLAIDKMA
SVFYTLLIPMLNPLIYSLRNKEVKDALKRTLTNRFKIPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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