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Report for CCDS31510.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31510.1 Public Homo sapiens 11 OR5D18 24 110 108 CCDS HistoryNCBI Gene:219438Re-query CCDS DB by CCDS ID:31510.1Re-query CCDS DB by GeneID:219438See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31510.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333976.7 ENSP00000335025.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333976.7Link to Ensembl Protein Viewer:ENSP00000335025.4Re-query CCDS DB by Nucleotide ID:ENST00000333976Re-query CCDS DB by Protein ID:ENSP00000335025
Original member Current member NCBI NM_001001952.1 NP_001001952.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001952.1Link to Protein Sequence:NP_001001952.1Re-query CCDS DB by Nucleotide ID:NM_001001952Re-query CCDS DB by Protein ID:NP_001001952Link to BLAST:NP_001001952.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001952.1 313 Q8NGL1 313 100% 0 0

Chromosomal Locations for CCDS 31510.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55819630 55820571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGCTGCTGACTGATAGAAATACAAGTGGGACCACGTTCACCCTCTTGGGCTTCTCAGATTACCCAGAAC
TGCAAGTCCCACTCTTCCTGGTTTTTCTGGCCATCTACAATGTCACTGTGCTAGGGAATATTGGGTTGAT
TGTGATCATCAAAATCAACCCCAAACTGCATACCCCCATGTACTTTTTCCTCAGCCAACTCTCCTTTGTG
GATTTCTGCTATTCCTCCATCATTGCTCCCAAGATGTTGGTGAACCTTGTTGTCAAAGACAGAACCATTT
CATTTTTAGGATGCGTAGTACAATTCTTTTTCTTCTGTACCTTTGTGGTCACTGAATCCTTTTTATTAGC
TGTGATGGCCTATGACCGCTTCGTGGCCATTTGCAACCCTCTGCTCTACACAGTTAACATGTCCCAGAAA
CTCTGCGTGCTGCTGGTTGTGGGATCCTATGCCTGGGGAGTCTCATGTTCCTTGGAACTGACGTGCTCTG
CTTTAAAGTTATGTTTTCATGGTTTCAACACAATCAATCACTTCTTCTGTGAGTTCTCCTCACTACTCTC
CCTTTCTTGCTCTGATACTTACATCAACCAGTGGCTGCTATTCTTTCTTGCCACCTTTAATGAAATCAGC
ACACTACTCATCGTTCTCACATCTTATGCGTTCATTGTTGTAACCATCCTCAAGATGCGTTCAGTCAGTG
GGCGCCGCAAAGCCTTCTCCACCTGTGCCTCCCACCTGACTGCCATCACCATCTTCCATGGCACCATCCT
CTTCCTTTACTGTGTGCCCAACTCCAAAAACTCCAGGCACACAGTCAAAGTGGCCTCTGTGTTTTACACC
GTGGTGATCCCCATGTTGAATCCCCTGATCTACAGTCTGAGAAATAAAGATGTCAAGGATACAGTCACCG
AGATACTGGACACCAAAGTCTTCTCTTACTGA

Translation (313 aa):
MLLTDRNTSGTTFTLLGFSDYPELQVPLFLVFLAIYNVTVLGNIGLIVIIKINPKLHTPMYFFLSQLSFV
DFCYSSIIAPKMLVNLVVKDRTISFLGCVVQFFFFCTFVVTESFLLAVMAYDRFVAICNPLLYTVNMSQK
LCVLLVVGSYAWGVSCSLELTCSALKLCFHGFNTINHFFCEFSSLLSLSCSDTYINQWLLFFLATFNEIS
TLLIVLTSYAFIVVTILKMRSVSGRRKAFSTCASHLTAITIFHGTILFLYCVPNSKNSRHTVKVASVFYT
VVIPMLNPLIYSLRNKDVKDTVTEILDTKVFSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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