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Report for CCDS31488.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31488.1 Public Homo sapiens 11 OR4S1 24 110 108 CCDS HistoryNCBI Gene:256148Re-query CCDS DB by CCDS ID:31488.1Re-query CCDS DB by GeneID:256148See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31488.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319988.1 ENSP00000321447.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319988.1Link to Ensembl Protein Viewer:ENSP00000321447.1Re-query CCDS DB by Nucleotide ID:ENST00000319988Re-query CCDS DB by Protein ID:ENSP00000321447
Original member Current member NCBI NM_001004725.1 NP_001004725.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004725.1Link to Protein Sequence:NP_001004725.1Re-query CCDS DB by Nucleotide ID:NM_001004725Re-query CCDS DB by Protein ID:NP_001004725Link to BLAST:NP_001004725.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004725.1 309 Q8NGB4 309 100% 0 0

Chromosomal Locations for CCDS 31488.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 48306223 48307152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGGTGCCAAGAACAATGTGACTGAGTTTGTTTTATTTGGCCTTTTTGAGAGCAGAGAGATGCAGCATA
CA
TGCTTTGTGGTATTCTTCCTCTTTCATGTGCTCACTGTCCTGGGGAACCTTCTGGTCATCATCACCAT
C
AATGCTAGAAAGACCCTGAAGTCTCCCATGTATTTCTTCCTGAGCCAGTTGTCTTTTGCTGACATATGT
TAT
CCATCCACTACCATACCCAAGATGATTGCTGACACTTTTGTGGAGCATAAGATCATCTCCTTCAATG
GC
TGCATGACCCAGCTCTTTTCTGCCCACTTCTTTGGTGGCACTGAGATCTTCCTCCTTACAGCCATGGC
C
TATGACCGCTATGTGGCCATCTGTAGGCCCCTGCACTACACAGCCATCATGGATTGCCGGAAGTGTGGC
CTG
CTAGCGGGGGCCTCCTGGTTAGCTGGCTTCCTGCATTCCATCCTGCAGACCCTCCTCACGGTTCAGC
TG
CCTTTTTGTGGGCCCAATGAGATAGACAACTTCTTCTGTGATGTTCATCCCCTGCTCAAGTTGGCCTG
T
GCAGACACCTACATGGTAGGTCTCATCGTGGTGGCCAACAGCGGTATGATTTCTTTAGCATCCTTTTTT
ATC
CTTATCATTTCCTATGTTATCATCTTACTGAACCTAAGAAGCCAGTCATCTGAGGACCGGCGTAAGG
CT
GTCTCCACATGTGGCTCACACGTAATCACTGTCCTTTTGGTTCTCATGCCCCCCATGTTCATGTACAT
T
CGTCCCTCCACCACCCTGGCTGCTGACAAACTTATCATCCTCTTTAACATTGTGATGCCACCTTTGCTG
AAC
CCTTTGATCTATACACTAAGGAACAACGATGTGAAAAATGCCATGAGGAAGCTGTTTAGGGTCAAGA
GG
AGCTTAGGGGAGAAGTGA


Translation (309 aa):
MGAKNNVTEFVLFGLFESREMQHTCFVVFFLFHVLTVLGNLLVIITINARKTLKSPMYFFLSQLSFADIC
Y
PSTTIPKMIADTFVEHKIISFNGCMTQLFSAHFFGGTEIFLLTAMAYDRYVAICRPLHYTAIMDCRKCG
L
LAGASWLAGFLHSILQTLLTVQLPFCGPNEIDNFFCDVHPLLKLACADTYMVGLIVVANSGMISLASFF
I
LIISYVIILLNLRSQSSEDRRKAVSTCGSHVITVLLVLMPPMFMYIRPSTTLAADKLIILFNIVMPPLL
N
PLIYTLRNNDVKNAMRKLFRVKRSLGEK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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