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Report for CCDS31379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31379.1 Public Homo sapiens 11 OR51B6 24 110 108 CCDS HistoryNCBI Gene:390058Re-query CCDS DB by CCDS ID:31379.1Re-query CCDS DB by GeneID:390058See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31379.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380219.1 ENSP00000369568.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380219.1Link to Ensembl Protein Viewer:ENSP00000369568.1Re-query CCDS DB by Nucleotide ID:ENST00000380219Re-query CCDS DB by Protein ID:ENSP00000369568
Original member Current member NCBI NM_001004750.1 NP_001004750.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004750.1Link to Protein Sequence:NP_001004750.1Re-query CCDS DB by Nucleotide ID:NM_001004750Re-query CCDS DB by Protein ID:NP_001004750Link to BLAST:NP_001004750.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004750.1 312 Q9H340 312 100% 0 0

Chromosomal Locations for CCDS 31379.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5351508 5352446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGGGCTCAATAAGTCTGCTTCCACCTTCCAGCTTACTGGCTTCCCAGGCATGGAGAAGGCACATCACT
GGATATTCATCCCATTATTGGCAGCCTACATCTCCATACTTCTTGGCAATGGCACTCTTCTCTTTCTCAT
CAGGAATGATCATAACCTCCATGAGCCCATGTACTATTTCTTAGCTATGTTGGCAGCTACAGACCTCGGA
GTGACATTGACCACAATGCCCACAGTGCTAGGTGTTCTGTGGTTAGATCACAGGGAGATTGGCCATGGAG
CCTGCTTCTCTCAGGCCTATTTTATCCATACTCTTTCTGTCATGGAGTCAGGTGTCTTGCTTGCCATGGC
TTATGACTGTTTCATTACCATCCGCAGCCCCTTAAGATATACCTCTATCCTGACCAACACCCAGGTAATG
AAGATTGGTGTGCGGGTATTGACAAGGGCTGGTCTGTCCATTATGCCAATAGTTGTTCGCCTACACTGGT
TTCCCTACTGTCGATCCCATGTACTCTCCCATGCTTTCTGTCTACACCAAGATGTCATCAAGCTAGCCTG
TGCTGACATCACCTTCAACCGTCTCTATCCAGTTGTAGTTTTATTTGCAATGGTCTTGTTGGACTTTCTC
ATCATCTTTTTCTCCTACATTTTGATTCTCAAGACTGTCATGGGCATTGGTTCTGGAGGAGAAAGGGCCA
AGGCCCTCAACACATGTGTCTCTCATATCTGCTGCATCCTGGTCTTCTATGTCACTGTAGTTTGTCTGAC
ATTTATTCATAGGTTTGGAAAGCATGTTCCTCATGTCGTTCACATCACAATGAGCTACATCCACTTCCTT
TTCCCACCTTTTATGAACCCATTTATCTATAGCATTAAAACTAAGCAGATTCAGAGTGGCATACTTCGTT
TATTCTCTCTGCCTCACTCTAGAGCATGA

Translation (312 aa):
MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLG
VTLTTMPTVLGVLWLDHREIGHGACFSQAYFIHTLSVMESGVLLAMAYDCFITIRSPLRYTSILTNTQVM
KIGVRVLTRAGLSIMPIVVRLHWFPYCRSHVLSHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFL
IIFFSYILILKTVMGIGSGGERAKALNTCVSHICCILVFYVTVVCLTFIHRFGKHVPHVVHITMSYIHFL
FPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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