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Report for CCDS31365.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31365.1 Public Homo sapiens 11 OR51G2 24 110 108 CCDS HistoryNCBI Gene:81282Re-query CCDS DB by CCDS ID:31365.1Re-query CCDS DB by GeneID:81282See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31365.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641926.1 ENSP00000493323.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641926.1Link to Ensembl Protein Viewer:ENSP00000493323.1Re-query CCDS DB by Nucleotide ID:ENST00000641926Re-query CCDS DB by Protein ID:ENSP00000493323
Original member Current member NCBI NM_001005238.2 NP_001005238.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005238.2Link to Protein Sequence:NP_001005238.1Re-query CCDS DB by Nucleotide ID:NM_001005238Re-query CCDS DB by Protein ID:NP_001005238Link to BLAST:NP_001005238.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005238.1 314 Q8NGK0 314 100% 0 0

Chromosomal Locations for CCDS 31365.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 4914719 4915663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGACCCTGGGATCCCTGGGAAACAGCAGCAGCAGCGTTTCTGCTACCTTCCTGCTGAGTGGCATCCCTG
GGCTGGAGCGCATGCACATCTGGATCTCCATCCCACTGTGCTTCATGTATCTGGTTTCCATCCCGGGCAA
CTGCACAATTCTTTTTATCATTAAAACAGAGCGCTCACTTCATGAACCTATGTATCTCTTCCTGTCCATG
CTGGCTCTGATTGACCTGGGTCTCTCCCTTTGCACTCTCCCTACAGTCCTGGGCATCTTTTGGGTTGGAG
CACGAGAAATTAGCCATGATGCCTGCTTTGCTCAGCTCTTTTTCATTCACTGCTTCTCCTTCCTCGAGTC
CTCTGTGCTACTGTCTATGGCCTTTGACCGCTTTGTGGCTATCTGCCACCCCTTGCACTATGTTTCCATT
CTCACCAACACAGTCATTGGCAGGATTGGCCTGGTCTCTCTGGGTCGTAGTGTAGCACTCATTTTTCCAT
TACCTTTTATGCTCAAAAGATTCCCCTATTGTGGCTCCCCAGTTCTCTCACATTCTTATTGTCTCCACCA
AGAAGTGATGAAATTGGCCTGTGCCGACATGAAGGCCAACAGCATCTACGGCATGTTTGTCATCGTCTCT
ACAGTGGGTATAGACTCACTGCTCATCCTCTTCTCTTATGCTCTGATCCTGCGCACCGTGCTGTCCATCG
CCTCCAGGGCTGAGAGATTCAAGGCCCTTAACACCTGTGTTTCCCACATCTGTGCTGTGCTGCTCTTCTA
CACTCCCATGATTGGCCTCTCTGTCATCCATCGCTTTGGAAAGCAGGCACCCCACCTGGTCCAGGTGGTC
ATGGGTTTCATGTATCTTCTCTTTCCTCCTGTGATGAATCCCATTGTCTACAGTGTGAAGACCAAACAGA
TCCGGGATCGAGTGACGCATGCCTTTTGTTACTAA

Translation (314 aa):
MTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSLHEPMYLFLSM
LALIDLGLSLCTLPTVLGIFWVGAREISHDACFAQLFFIHCFSFLESSVLLSMAFDRFVAICHPLHYVSI
LTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLSHSYCLHQEVMKLACADMKANSIYGMFVIVS
TVGIDSLLILFSYALILRTVLSIASRAERFKALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPHLVQVV
MGFMYLLFPPVMNPIVYSVKTKQIRDRVTHAFCY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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