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Report for CCDS31359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31359.1 Public Homo sapiens 11 OR51F1 24 110 108 CCDS HistoryNCBI Gene:256892Re-query CCDS DB by CCDS ID:31359.1Re-query CCDS DB by GeneID:256892See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Polymorphic pseudogene

Sequence IDs included in CCDS 31359.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000624103.2 ENSP00000485387.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000624103.2Link to Ensembl Protein Viewer:ENSP00000485387.2Re-query CCDS DB by Nucleotide ID:ENST00000624103Re-query CCDS DB by Protein ID:ENSP00000485387
Original member Current member NCBI NM_001004752.2 NP_001004752.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004752.2Link to Protein Sequence:NP_001004752.2Re-query CCDS DB by Nucleotide ID:NM_001004752Re-query CCDS DB by Protein ID:NP_001004752Link to BLAST:NP_001004752.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004752.2 319 A6NGY5 319 100% 0 0

Chromosomal Locations for CCDS 31359.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 4768979 4769938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGCTGCAAAACCAGGACACCATGGAAATCCTAAGCAACTCAACATCTAAATTTCCAACCTTCTTGTTGA
CCGGCATTCCTGGCCTAGAGTCTGCCCATGTCTGGATCTCCATTCCTTTCTGTTGTTTTTATGCCATTGC
CCTCTCTGGGAACAGCGTGATCCTGTTTGTCATCATTACCCAGCAGAGTCTCCATGAACCCATGTATTAT
TTCCTCTTCAGGCTATCAGCCACTGATCTGGGCTTGACTGTTTCTTCATTGTCAACAACATTAGGTATCC
TCTGGTTTGAGGCACGTGAAATCAGTCTATATAGCTGCATTGTCCAGATGTTTTTTCTTCATGGATTCAC
TTTTATGGAATCTGGAGTGCTGGTGGCTACAGCCTTTGACCGTTATGTGGCCATCTGTGACCCTCTGAGG
TACACTACCATTCTCACTAATTCCAGAATCATTCAAATGGGTCTTCTGATGATTACACGTGCTATAGTAC
TAATATTGCCACTACTTTTGCTCCTTAAGCCTCTCTATTTCTGTAGAATGAATGCCCTTTCTCACTCCTA
TTGTTACCATCCAGATGTGATTCAATTAGCATGTTCAGACATTCGGGCAAATAGCATCTGTGGATTAATT
GATCTCATCCTGACCACTGGAATAGATACACCATGCATTGTCCTGTCATATATCTTAATTATTCACTCTG
TCCTCAGAATTGCCTCCCCTGAAGAATGGCACAAGGTCTTCAGCACCTGTGTCTCCCATGTGGGAGCAGT
TGCTTTCTTCTACATCCACATGCTGAGCCTGTCCTTGGTGTATCGCTATGGTCGGTCAGCCCCCAGAGTA
GTCCATTCAGTGATGGCTAATGTATACCTGCTTTTACCCCCTGTGCTCAACCCCATCATCGACAGTGTAA
AAACAAAACAAATCCGCAAGGCTATGCTCAGTCTGCTGCTTACAAAATGA

Translation (319 aa):
MLQNQDTMEILSNSTSKFPTFLLTGIPGLESAHVWISIPFCCFYAIALSGNSVILFVIITQQSLHEPMYY
FLFRLSATDLGLTVSSLSTTLGILWFEAREISLYSCIVQMFFLHGFTFMESGVLVATAFDRYVAICDPLR
YTTILTNSRIIQMGLLMITRAIVLILPLLLLLKPLYFCRMNALSHSYCYHPDVIQLACSDIRANSICGLI
DLILTTGIDTPCIVLSYILIIHSVLRIASPEEWHKVFSTCVSHVGAVAFFYIHMLSLSLVYRYGRSAPRV
VHSVMANVYLLLPPVLNPIIDSVKTKQIRKAMLSLLLTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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