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Report for CCDS31343.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31343.1 Public Homo sapiens 11 OSBPL5 24 110 108 CCDS HistoryNCBI Gene:114879Re-query CCDS DB by CCDS ID:31343.1Re-query CCDS DB by GeneID:114879See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31343.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348039.9 ENSP00000302872.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000348039.9Link to Ensembl Protein Viewer:ENSP00000302872.8Re-query CCDS DB by Nucleotide ID:ENST00000348039Re-query CCDS DB by Protein ID:ENSP00000302872
Original member Current member EBI ENST00000389989.7 ENSP00000374639.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389989.7Link to Ensembl Protein Viewer:ENSP00000374639.3Re-query CCDS DB by Nucleotide ID:ENST00000389989Re-query CCDS DB by Protein ID:ENSP00000374639
Original member Current member NCBI NM_001144063.2 NP_001137535.1 Accepted alive Link to Nucleotide Sequence:NM_001144063.2Link to Protein Sequence:NP_001137535.1Re-query CCDS DB by Nucleotide ID:NM_001144063Re-query CCDS DB by Protein ID:NP_001137535Link to BLAST:NP_001137535.1
Original member Current member NCBI NM_145638.3 NP_663613.1 Accepted alive Link to Nucleotide Sequence:NM_145638.3Link to Protein Sequence:NP_663613.1Re-query CCDS DB by Nucleotide ID:NM_145638Re-query CCDS DB by Protein ID:NP_663613Link to BLAST:NP_663613.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137535.1 811 Q9H0X9-2 811 100% 0 0
NP_663613.1 811 Q9H0X9-2 811 100% 0 0

Chromosomal Locations for CCDS 31343.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3088205 3088343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3089846 3089948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3090558 3090696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3092432 3092558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3092867 3093052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3093527 3093663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3093746 3093835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3094237 3094334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3100158 3100256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3101603 3101699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3102183 3102281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3103239 3103320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3104193 3104377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3107263 3107455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3107771 3107945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3119547 3119631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3121997 3122098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3122348 3122428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3126473 3126555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3129013 3129148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2436 nt):
ATGAAGGAGGAGGCCTTCCTCCGGCGCCGCTTCTCCCTGTGTCCACCTTCCTCCACCCCTCAGAAAGTCG
ACCCCCGGAAGCTCACCCGGAACTTGCTCCTCAGCGGAGACAATGAGCTCTACCCACTCAGCCCAGGGAA
GGACATGGAGCCCAACGGCCCGTCGCTGCCCAGGGATGAAGGGCCCCCGACCCCAAGCTCTGCCACGAAG
GTGCCACCGGCAGAGTACAGGCTGTGCAACGGGTCAGACAAGGAATGTGTGTCCCCCACCGCCAGGGTCA
CCAAGAAGGAGACTCTCAAGGCGCAGAAGGAGAACTACCGGCAGGAGAAGAAGCGCGCCACACGGCAGCT
GCTCAGCGCTCTGACAGACCCCAGCGTGGTCATCATGGCTGACAGCCTGAAGGGCCCCAAAGGTGAGAGC
GTGGGCTCCATCACACAGCCCCTGCCCAGCAGCTACCTGATCTTCAGGGCCGCCTCCGAGTCAGATGGTC
GCTGCTGGCTGGACGCCCTGGAGCTGGCCCTGCGCTGCTCTAGCCTACTGAGACTGGGCACCTGCAAGCC
GGGCCGAGACGGGGAGCCAGGGACCTCGCCAGACGCATCACCCTCATCGCTCTGTGGGCTGCCAGCCTCA
GCCACCGTCCACCCAGACCAAGACCTGTTCCCACTGAACGGGTCTTCCCTGGAGAACGATGCATTCTCAG
ACAAGTCGGAGAGAGAGAACCCTGAGGAGTCAGATACCGAGACCCAGGACCATAGCCGGAAGACGGAGAG
TGGCAGCGACCAGTCAGAGACCCCTGGGGCCCCGGTGCGGAGAGGGACCACCTATGTGGAGCAGGTCCAG
GAGGAGCTGGGGGAGCTGGGCGAGGCGTCCCAGGTGGAGACAGTGTCAGAGGAGAACAAGAGTCTGATGT
GGACCCTGCTGAAGCAGCTACGGCCAGGCATGGACCTGTCCCGCGTGGTGCTACCCACGTTCGTACTGGA
GCCGCGCTCCTTCCTGAACAAGCTCTCCGACTACTACTACCACGCAGACCTGCTCTCCAGGGCTGCGGTG
GAGGAGGATGCCTACAGCCGCATGAAGCTGGTGCTGCGGTGGTACCTGTCTGGCTTCTACAAGAAGCCCA
AGGGAATCAAGAAGCCGTACAACCCCATCCTGGGGGAGACCTTCCGCTGCTGCTGGTTCCACCCGCAGAC
TGACAGCCGCACATTCTACATAGCAGAGCAGGTGTCCCACCACCCGCCCGTGTCTGCCTTCCACGTCAGC
AACCGGAAGGACGGCTTCTGCATCAGTGGCAGCATCACAGCCAAGTCCAGGTTTTATGGGAACTCGCTGT
CGGCGCTGCTGGACGGCAAAGCCACGCTCACCTTCCTGAACCGAGCCGAGGATTACACCCTTACCATGCC
CTACGCCCACTGCAAAGGAATCCTGTATGGCACGATGACCCTGGAGCTGGGTGGGAAGGTCACCATCGAG
TGTGCGAAGAACAACTTCCAGGCCCAGCTGGAATTCAAACTCAAGCCCTTCTTCGGGGGTAGCACCAGCA
TCAACCAGATCTCGGGAAAGATCACGTCGGGAGAGGAAGTCCTGGCGAGCCTCAGTGGCCACTGGGACAG
GGACGTGTTTATCAAGGAGGAAGGGAGCGGAAGCAGTGCGCTTTTCTGGACCCCGAGCGGGGAGGTCCGC
AGACAGAGGCTGAGGCAGCACACGGTGCCGCTGGAGGAGCAGACGGAGCTGGAGTCCGAGAGGCTCTGGC
AGCACGTCACCAGGGCCATCAGCAAGGGCGACCAGCACAGGGCCACACAGGAGAAGTTTGCACTGGAGGA
GGCACAGCGGCAGCGGGCCCGTGAGCGGCAGGAGAGCCTCATGCCCTGGAAGCCGCAGCTGTTCCACCTG
GACCCCATCACCCAGGAGTGGCACTACCGATACGAGGACCACAGCCCCTGGGACCCCCTGAAGGACATCG
CCCAGTTTGAGCAAGACGGGATCCTGCGGACCTTGCAGCAGGAGGCCGTGGCCCGCCAGACCACCTTCCT
GGGCAGCCCAGGGCCCAGGCACGAGAGGTCTGGCCCAGACCAGCGGCTTCGCAAGGCCAGCGACCAGCCC
TCCGGCCACAGCCAGGCCACGGAGAGCAGCGGATCCACGCCTGAGTCCTGCCCAGAGCTCTCAGACGAGG
AGCAGGATGGTGACTTTGTCCCTGGCGGTGAGAGCCCATGCCCTCGGTGCAGGAAGGAGGCGCGGCGGCT
GCAGGCCCTGCACGAGGCCATCCTCTCCATCCGAGAGGCCCAGCAGGAGCTGCACAGGCACCTCTCGGCC
ATGCTGAGCTCCACGGCACGGGCAGCACAGGCACCGACCCCAGGCCTCCTGCAGAGCCCCCGATCCTGGT
TCCTGCTCTGCGTGTTCCTGGCGTGTCAGCTGTTCATTAACCACATCCTCAAATAG

Translation (811 aa):
MKEEAFLRRRFSLCPPSSTPQKVDPRKLTRNLLLSGDNELYPLSPGKDMEPNGPSLPRDEGPPTPSSATK
VPPAEYRLCNGSDKECVSPTARVTKKETLKAQKENYRQEKKRATRQLLSALTDPSVVIMADSLKGPKGES
VGSITQPLPSSYLIFRAASESDGRCWLDALELALRCSSLLRLGTCKPGRDGEPGTSPDASPSSLCGLPAS
ATVHPDQDLFPLNGSSLENDAFSDKSERENPEESDTETQDHSRKTESGSDQSETPGAPVRRGTTYVEQVQ
EELGELGEASQVETVSEENKSLMWTLLKQLRPGMDLSRVVLPTFVLEPRSFLNKLSDYYYHADLLSRAAV
EEDAYSRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCCWFHPQTDSRTFYIAEQVSHHPPVSAFHVS
NRKDGFCISGSITAKSRFYGNSLSALLDGKATLTFLNRAEDYTLTMPYAHCKGILYGTMTLELGGKVTIE
CAKNNFQAQLEFKLKPFFGGSTSINQISGKITSGEEVLASLSGHWDRDVFIKEEGSGSSALFWTPSGEVR
RQRLRQHTVPLEEQTELESERLWQHVTRAISKGDQHRATQEKFALEEAQRQRARERQESLMPWKPQLFHL
DPITQEWHYRYEDHSPWDPLKDIAQFEQDGILRTLQQEAVARQTTFLGSPGPRHERSGPDQRLRKASDQP
SGHSQATESSGSTPESCPELSDEEQDGDFVPGGESPCPRCRKEARRLQALHEAILSIREAQQELHRHLSA
MLSSTARAAQAPTPGLLQSPRSWFLLCVFLACQLFINHILK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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