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Report for CCDS31325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31325.1 Public Homo sapiens 11 SIGIRR 24 110 108 CCDS HistoryNCBI Gene:59307Re-query CCDS DB by CCDS ID:31325.1Re-query CCDS DB by GeneID:59307See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31325.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332725.7 ENSP00000333656.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000332725.7Link to Ensembl Protein Viewer:ENSP00000333656.3Re-query CCDS DB by Nucleotide ID:ENST00000332725Re-query CCDS DB by Protein ID:ENSP00000333656
Original member Current member EBI ENST00000397632.7 ENSP00000380756.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397632.7Link to Ensembl Protein Viewer:ENSP00000380756.3Re-query CCDS DB by Nucleotide ID:ENST00000397632Re-query CCDS DB by Protein ID:ENSP00000380756
Original member Current member EBI ENST00000431843.7 ENSP00000403104.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000431843.7Link to Ensembl Protein Viewer:ENSP00000403104.2Re-query CCDS DB by Nucleotide ID:ENST00000431843Re-query CCDS DB by Protein ID:ENSP00000403104
Original member Current member NCBI NM_001135053.2 NP_001128525.1 Accepted alive Link to Nucleotide Sequence:NM_001135053.2Link to Protein Sequence:NP_001128525.1Re-query CCDS DB by Nucleotide ID:NM_001135053Re-query CCDS DB by Protein ID:NP_001128525Link to BLAST:NP_001128525.1
Original member Current member NCBI NM_001135054.2 NP_001128526.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001135054.2Link to Protein Sequence:NP_001128526.1Re-query CCDS DB by Nucleotide ID:NM_001135054Re-query CCDS DB by Protein ID:NP_001128526Link to BLAST:NP_001128526.1
Original member Current member NCBI NM_021805.3 NP_068577.2 Accepted alive Link to Nucleotide Sequence:NM_021805.3Link to Protein Sequence:NP_068577.2Re-query CCDS DB by Nucleotide ID:NM_021805Re-query CCDS DB by Protein ID:NP_068577Link to BLAST:NP_068577.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128525.1 410 Q6IA17-1 410 100% 0 0
NP_001128526.1 410 Q6IA17-1 410 100% 0 0
NP_068577.2 410 Q6IA17-1 410 100% 0 0

Chromosomal Locations for CCDS 31325.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 405896 406059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 406349 406538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 406843 406993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 407062 407164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 407425 407568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 407817 407957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 408073 408206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 408695 408893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 409868 409874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGCCAGGTGTCTGTGATAGGGCCCCTGACTTCCTCTCCCCGTCTGAAGACCAGGTGCTGAGGCCTGCCT
TGGGCAGCTCAGTGGCTCTGAACTGCACGGCTTGGGTAGTCTCTGGGCCCCACTGCTCCCTGCCTTCAGT
CCAGTGGCTGAAAGACGGGCTTCCATTGGGAATTGGGGGCCACTACAGCCTCCACGAGTACTCCTGGGTC
AAGGCCAACCTGTCAGAGGTGCTTGTGTCCAGTGTCCTGGGGGTCAACGTGACCAGCACTGAAGTCTATG
GGGCCTTCACCTGCTCCATCCAGAACATCAGCTTCTCCTCCTTCACTCTTCAGAGAGCTGGCCCTACAAG
CCACGTGGCTGCGGTGCTGGCCTCCCTCCTGGTCCTGCTGGCCCTGCTGCTGGCCGCCCTGCTCTATGTC
AAGTGCCGTCTCAACGTGCTGCTCTGGTACCAGGACGCGTATGGGGAGGTGGAGATAAACGACGGGAAGC
TCTACGACGCCTACGTCTCCTACAGCGACTGCCCCGAGGACCGCAAGTTCGTGAACTTCATCCTAAAGCC
GCAGCTGGAGCGGCGTCGGGGCTACAAGCTCTTCCTGGACGACCGCGACCTCCTGCCGCGCGCTGAGCCC
TCCGCCGACCTCTTGGTGAACCTGAGCCGCTGCCGACGCCTCATCGTGGTGCTTTCGGACGCCTTCCTGA
GCCGGGCCTGGTGCAGCCACAGCTTCCGGGAGGGCCTGTGCCGGCTGCTGGAGCTCACCCGCAGACCCAT
CTTCATCACCTTCGAGGGCCAGAGGCGCGACCCCGCGCACCCGGCGCTCCGCCTGCTGCGCCAGCACCGC
CACCTGGTGACCTTGCTGCTCTGGAGGCCCGGCTCCGTGACTCCTTCCTCCGATTTTTGGAAAGAAGTGC
AGCTGGCGCTGCCGCGGAAGGTGCAGTACAGGCCTGTGGAAGGAGACCCCCAGACGCAGCTGCAGGACGA
CAAGGACCCCATGCTGATTCTTCGAGGCCGAGTCCCTGAGGGCCGGGCCCTGGACTCAGAGGTGGACCCG
GACCCTGAGGGCGACCTGGGTGTCCGGGGGCCTGTCTTTGGAGAGCCATCAGCTCCACCGCACACCAGTG
GGGTCTCGCTGGGAGAGAGCCGGAGCAGCGAAGTGGACGTCTCGGATCTCGGCTCGCGAAACTACAGTGC
CCGCACAGACTTCTACTGCCTGGTGTCCAAGGATGATATGTAG

Translation (410 aa):
MPGVCDRAPDFLSPSEDQVLRPALGSSVALNCTAWVVSGPHCSLPSVQWLKDGLPLGIGGHYSLHEYSWV
KANLSEVLVSSVLGVNVTSTEVYGAFTCSIQNISFSSFTLQRAGPTSHVAAVLASLLVLLALLLAALLYV
KCRLNVLLWYQDAYGEVEINDGKLYDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEP
SADLLVNLSRCRRLIVVLSDAFLSRAWCSHSFREGLCRLLELTRRPIFITFEGQRRDPAHPALRLLRQHR
HLVTLLLWRPGSVTPSSDFWKEVQLALPRKVQYRPVEGDPQTQLQDDKDPMLILRGRVPEGRALDSEVDP
DPEGDLGVRGPVFGEPSAPPHTSGVSLGESRSSEVDVSDLGSRNYSARTDFYCLVSKDDM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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