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Report for CCDS31232.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31232.1 Public Homo sapiens 10 PLAC9 24 110 108 CCDS HistoryNCBI Gene:219348Re-query CCDS DB by CCDS ID:31232.1Re-query CCDS DB by GeneID:219348See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31232.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372263.4 ENSP00000361337.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372263.4Link to Ensembl Protein Viewer:ENSP00000361337.3Re-query CCDS DB by Nucleotide ID:ENST00000372263Re-query CCDS DB by Protein ID:ENSP00000361337
Original member Current member NCBI NM_001012973.3 NP_001012991.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012973.3Link to Protein Sequence:NP_001012991.1Re-query CCDS DB by Nucleotide ID:NM_001012973Re-query CCDS DB by Protein ID:NP_001012991Link to BLAST:NP_001012991.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012991.1 97 Q5JTB6 97 100% 0 0

Chromosomal Locations for CCDS 31232.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80132763 80132826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80142082 80142179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80144223 80144343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80144900 80144910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (294 nt):
ATGCGGCCCCTGCTCTGCGCGCTGACCGGACTGGCCCTGCTCCGCGCCGCGGGCTCTTTGGCCGCTGCCG
AACCCTTCAGCCCTCCGCGAGGAGACTCAGCTCAGAGCACAGCGTGTGACAGACACATGGCTGTGCAACG
CCGTCTAGATGTCATGGAGGAGATGGTAGAGAAGACCGTGGATCACCTGGGGACAGAGGTGAAAGGCCTG
CTGGGCCTGCTGGAGGAGCTGGCCTGGAACCTGCCCCCGGGACCCTTCAGCCCCGCTCCCGACCTTCTCG
GAGATGGCTTCTGA

Translation (97 aa):
MRPLLCALTGLALLRAAGSLAAAEPFSPPRGDSAQSTACDRHMAVQRRLDVMEEMVEKTVDHLGTEVKGL
LGLLEELAWNLPPGPFSPAPDLLGDGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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