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Report for CCDS31171.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31171.1 Public Homo sapiens 10 ABI1 24 110 108 CCDS HistoryNCBI Gene:10006Re-query CCDS DB by CCDS ID:31171.1Re-query CCDS DB by GeneID:10006See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31171.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376140.4 ENSP00000365310.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376140.4Link to Ensembl Protein Viewer:ENSP00000365310.3Re-query CCDS DB by Nucleotide ID:ENST00000376140Re-query CCDS DB by Protein ID:ENSP00000365310
Original member Current member NCBI NM_001012750.3 NP_001012768.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012750.3Link to Protein Sequence:NP_001012768.1Re-query CCDS DB by Nucleotide ID:NM_001012750Re-query CCDS DB by Protein ID:NP_001012768Link to BLAST:NP_001012768.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012768.1 481 Q8IZP0-9 481 100% 0 0

Chromosomal Locations for CCDS 31171.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 26748570 26748745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26751598 26751783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26755655 26755741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26759062 26759238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26765218 26765318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26768852 26768992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26770245 26770345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26771075 26771089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26777065 26777241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26823138 26823305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26860747 26860863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGGCAGAGCTGCAGATGTTACTAGAGGAGGAGATCCCGTCTGGCAAGAGGGCGCTGATCGAGAGTTACC
AG
AACCTGACTCGGGTGGCAGACTACTGTGAAAACAACTACATACAGGCTACAGACAAGAGAAAAGCTTT
A
GAGGAGACCAAAGCCTATACAACCCAATCTCTAGCTAGTGTTGCTTATCAAATAAATGCATTGGCCAAC
AAT
GTACTCCAGTTGCTGGATATCCAAGCCTCTCAGCTTCGGAGAATGGAGTCTTCCATCAATCATATCT
CA
CAGACTGTGGATATTCATAAGGAGAAAGTGGCACGAAGAGAGATTGGTATTTTGACAACAAATAAGAA
T
ACATCAAGAACTCACAAAATAATAGCACCTGCGAATATGGAGCGCCCTGTAAGGTATATTCGGAAACCT
ATC
GATTACACAGTTCTGGATGATGTGGGCCATGGTGTCAAGTGGCTAAAAGCCAAGCATGGAAATAACC
AG
CCTGCAAGAACTGGCACACTGTCGAGAACAAATCCTCCTACTCAGAAACCGCCAAGTCCTCCCATGTC
A
GGCCGGGGAACACTGGGACGGAATACTCCTTATAAAACCCTGGAACCTGTTAAACCCCCAACAGTTCCT
AAT
GACTATATGACCAGTCCTGCTAGGCTTGGAAGTCAGCATAGTCCAGGCAGGACAGCATCTTTAAATC
AG
AGACCAAGGACACACAGTGGAAGTAGTGGAGGAAGTGGAAGTCGAGAAAACAGTGGTAGCAGTAGTAT
T
GGCATTCCCATTGCTGTGCCTACACCTTCGCCACCCACTATTGGACCAGCAGCCCCGGGCTCAGCTCCT
GGT
TCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTACTTCTTCGACATCTTCTG
GT
GGATACAGACGAACTCCCTCTGTGACTGCTCAATTTTCTGCTCAGCCTCATGTTAATGGAGGTCCACT
T
TATTCTCAAAATTCAATTTCTATTGCTCCACCCCCTCCCCCTATGCCTCAGTTGACTCCACAGATACCT
CTC
ACAGGCTTCGTGGCCAGGGTGCAGGAAAACATTGCTGATAGTCCAACTCCACCGCCACCACCTCCAC
CA
GATGACATTCCCATGTTTGATGACTCTCCACCTCCCCCACCACCACCACCAGTGGATTATGAAGATGA
G
GAGGCTGCAGTAGTTCAGTATAATGATCCATATGCAGATGGGGATCCTGCTTGGGCCCCCAAGAATTAT
ATT
GAGAAAGTTGTTGCAATATATGATTATACAAAAGACAAGGATGATGAGCTGTCATTTATGGAGGGTG
CA
ATCATTTATGTTATAAAGAAGAATGATGATGGCTGGTATGAAGGAGTCTGCAATCGAGTGACTGGTCT
G
TTCCCTGGGAACTATGTTGAATCAATCATGCACTATACTGATTAA


Translation (481 aa):
MAELQMLLEEEIPSGKRALIESYQNLTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALAN
N
VLQLLDIQASQLRRMESSINHISQ
TVDIHKEKVARREIGILTTNKNTSRTHKIIAPANMERPVRYIRKP
I
DYTVLDDVGHGVK
WLKAKHGNNQPARTGTLSRTNPPTQKPPSPPMSGRGTLGRNTPYKTLEPVKPPTVP
N
DYMTSPARLGSQHSPGRTASLNQRPRTH
SGSSGGSGSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP
G
SQYGTMTRQISRHNSTTSSTSSGGYRRTPSVTAQFSAQPHVNGGPLYSQNS
ISIAPPPPPMPQLTPQIP
L
TGFVARVQEN
IADSPTPPPPPPPDDIPMFDDSPPPPPPPPVDYEDEEAAVVQYNDPYADGDPAWAPKNY
I
EK
VVAIYDYTKDKDDELSFMEGAIIYVIKKNDDGWYEGVCNRVTGLFPGNYVESIMHYTD



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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