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Report for CCDS31037.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31037.2 Public Homo sapiens 1 WDR26 24 110 108 CCDS HistoryNCBI Gene:80232Re-query CCDS DB by CCDS ID:31037.2Re-query CCDS DB by GeneID:80232See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 31037.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 31037.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000678917.1 ENSP00000504428.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678917.1Link to Ensembl Protein Viewer:ENSP00000504428.1Re-query CCDS DB by Nucleotide ID:ENST00000678917Re-query CCDS DB by Protein ID:ENSP00000504428
Original member Current member NCBI NM_025160.7 NP_079436.4 Accepted alive Link to Nucleotide Sequence:NM_025160.7Link to Protein Sequence:NP_079436.4Re-query CCDS DB by Nucleotide ID:NM_025160Re-query CCDS DB by Protein ID:NP_079436Link to BLAST:NP_079436.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079436.4 661 Q9H7D7-1 661 100% 0 0

Chromosomal Locations for CCDS 31037.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 224389835 224389860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224393828 224394013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224398097 224398226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224398515 224398593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224398889 224399034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224400950 224401069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224404430 224404570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224411427 224411565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224418260 224418416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224419518 224419615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224424518 224424654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224431477 224431581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224431682 224431781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224433684 224434105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1986 nt):
ATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGAGGTGGCGGCGGCGGCGGTGGAGGAGGAGGGGGCGGCG
GGGGCCAGGGACAGACCCCGGAACTCGCCTGCTTGTCGGCCCAGAACGGGGAGTCGTCCCCCTCGTCGTC
GTCGTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTCCGCCCCCTCCGCCGCCAGCAACAAT
AGCAACAGCCTGAATGTCAATAACGGGGTTCCCGGCGGGGCGGCCGCCGCATCCTCAGCCACCGTCGCAG
CTGCCTCCGCCACCACCGCCGCCTCCTCTTCCTTGGCCACCCCAGAACTGGGCAGCAGCCTCAAGAAGAA
GAAGCGGCTCTCCCAGTCAGATGAGGATGTCATTAGGCTAATAGGACAGCACTTGAATGGCTTAGGGCTC
AACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAACATCCTTCTGCTACCAAATTCC
GAAATCATGTCATGGAAGGAGACTGGGATAAGGCAGAAAATGACCTGAATGAACTAAAGCCTTTAGTGCA
TTCTCCTCATGCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAATAATTGTGAGG
ATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATACCTGGAGGATGGCAAGGTCCTGGAGGCACTTC
AAGTTCTACGCTGTGAATTGACGCCGCTGAAATACAATACAGAGCGCATTCATGTTCTTAGTGGGTATCT
GATGTGTAGCCATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAGGCAAAGGGACAGCTTCCCGATCT
AAACTATTGGATAAACTTCAGACCTATTTACCACCATCAGTGATGCTTCCCCCACGGCGTTTACAGACTC
TCCTGCGGCAGGCGGTGGAACTACAAAGGGATCGGTGCCTATATCACAATACCAAACTTGATAATAATCT
AGATTCTGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAGGCAGTTCCCATGTTATACGCAGCAGATA
CTTACGGAGCATTGTAATGAAGTGTGGTTCTGTAAATTCTCTAATGATGGCACTAAACTAGCAACAGGAT
CAAAAGATACAACAGTTATCATATGGCAAGTTGATCCGGATACACACCTGCTAAAACTGCTTAAAACATT
AGAAGGACATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACAACTATCTTGTTGCTTGTGGC
CCAGATGACTGCTCTGAGCTTTGGCTTTGGAATGTACAAACAGGAGAACTAAGGACAAAAATGAGCCAGT
CTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGCTTTGTGACTGGAGGTCAGCG
TGGGCAGTTCTATCAGTGTGACTTAGATGGTAATCTCCTTGACTCCTGGGAAGGGGTAAGAGTGCAATGC
CTTTGGTGCTTGAGTGATGGAAAGACTGTTCTGGCATCAGATACACACCAGCGAATTCGGGGCTATAACT
TCGAGGACCTTACAGATAGGAACATAGTACAAGAAGATCATCCTATTATGTCTTTTACTATTTCAAAAAA
TGGCCGATTAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATTTATGGGACTTGCAAGACAGAGTTTTA
GTAAGAAAGTATCAAGGTGTTACACAAGGGTTTTATACAATTCATTCATGTTTTGGAGGCCATAATGAAG
ACTTCATCGCTAGTGGCAGTGAAGATCACAAGGTTTACATCTGGCACAAACGTAGTGAACTGCCAATTGC
GGAGCTGACAGGGCACACACGTACAGTAAACTGTGTGAGCTGGAACCCACAGATTCCATCCATGATGGCC
AGCGCCTCAGATGATGGCACTGTTAGAATATGGGGACCAGCACCTTTTATAGACCACCAGAATATTGAAG
AGGAATGCAGTAGCATGGATAGTTGA

Translation (661 aa):
MQANGAGGGGGGGGGGGGGGGGGGGQGQTPELACLSAQNGESSPSSSSSAGDLAHANGLLPSAPSAASNN
SNSLNVNNGVPGGAAAASSATVAAASATTAASSSLATPELGSSLKKKKRLSQSDEDVIRLIGQHLNGLGL
NQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVR
MKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRS
KLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQI
LTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACG
PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQC
LWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVL
VRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMA
SASDDGTVRIWGPAPFIDHQNIEEECSSMDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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