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Report for CCDS30984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30984.1 Public Homo sapiens 1 TMCC2 24 110 108 CCDS HistoryNCBI Gene:9911Re-query CCDS DB by CCDS ID:30984.1Re-query CCDS DB by GeneID:9911See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30984.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358024.8 ENSP00000350718.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358024.8Link to Ensembl Protein Viewer:ENSP00000350718.3Re-query CCDS DB by Nucleotide ID:ENST00000358024Re-query CCDS DB by Protein ID:ENSP00000350718
Original member Current member NCBI NM_014858.4 NP_055673.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014858.4Link to Protein Sequence:NP_055673.2Re-query CCDS DB by Nucleotide ID:NM_014858Re-query CCDS DB by Protein ID:NP_055673Link to BLAST:NP_055673.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055673.2 709 O75069-1 709 100% 0 0

Chromosomal Locations for CCDS 30984.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 205228565 205228771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205241505 205242044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205268950 205269884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205271120 205271255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205271813 205272124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2130 nt):
ATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAACAGGGCGAGGAGGATGGAGCTGGGCTGGAAGATG
CCGCTTCCCACCTGCCGGGCGCGGACCTCCGGCCTGGGGAGACCACGGGTGCTAACTCTGCTGGCGGGCC
AACTTCAGACGCCGGCGCTGCCGCGGCGCCCAACCCAGGTCCCCGAAGCAAGCCTCCTGATTTAAAGAAA
ATCCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGT
CTCGGGAAAGGGAGCACCAGACGTCTCAGGATTCCCAGCAGCATCAGCAGCAGCAGGGTATGTCCGACCA
TGACTCCCCAGATGAGAAGGAGCGCTCTCCGGAGATGCATCGCGTCTCCTACGCCATGTCCCTGCACGAC
CTGCCCGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGCAGATCCGCTCCCGGCCCTCCATCAAGCGGG
GCGCCAGCCTGCACAGCAGCAGTGGGGGCGGCAGCAGCGGGAGCAGCAGCCGGCGCACCAAGAGTAGCTC
CCTGGAGCCCCAGCGTGGCAGCCCTCACCTGCTGCGCAAGGCCCCCCAGGACAGCAGCCTGGCCGCCATC
CTGCACCAGCACCAGTGCCGTCCCCGCTCTTCCTCCACCACCGACACTGCTCTGCTGCTGGCCGACGGCA
GCAACGTGTACCTCCTGGCTGAGGAGGCCGAAGGCATCGGGGACAAGGTCGATAAGGGAGACCTGGTGGC
CCTGAGCCTCCCCGCCGGCCATGGTGACACCGACGGCCCCATCAGCCTGGACGTGCCCGATGGGGCACCG
GACCCCCAGCGGACCAAGGCCGCCATTGACCACCTGCACCAGAAGATCCTGAAGATCACCGAGCAGATCA
AGATTGAGCAGGAGGCTCGCGACGACAATGTGGCAGAGTATCTGAAACTGGCCAACAACGCGGACAAGCA
GCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAAGAACCAGAAGTCAGCCCAGACCATCGCCCAGCTG
CACAAGAAGCTGGAGCACTACCGCCGGCGCCTGAAGGAGATTGAGCAGAACGGGCCCTCGCGGCAGCCCA
AGGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCATCAGCGG
CTTTGGGGGCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGGCCTCTCACAGGCCACCCACACCGCC
GTGGTGTCCAAGCCCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGACAACATCGCCC
ACCTGAAGGACCCCCTGGAAGATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACT
CGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAGGC
AGCAACTCTGGGGCTGGGCCTGGTGGGGCGCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCTG
GAAACCTGGATGCTCTGCTGGAAGAGCTACGGGAGATCAAGGAGGGACAGTCTCACCTGGAGGACTCCAT
GGAAGACCTGAAGACTCAGCTGCAGAGGGACTACACCTACATGACCCAGTGCCTGCAGGAGGAGCGCTAC
AGGTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGAACCTGA
AGCAGGAGCTGGCCAGCATGGAGGAGAAGGTGGCCTACCAGTCCTATGAGAGGGCACGGGACATCCAGGA
GGCCGTGGAGTCCTGCCTGACCCGGGTCACCAAGCTGGAGCTGCAGCAGCAACAGCAGCAGGTGGTACAG
CTGGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGCTGGGCAAGTTCATCAACGTGATCCTGGCGCTCA
TGGCCGTGCTGCTGGTGTTCGTGTCCACCATCGCCAACTTCATCACGCCCCTCATGAAGACACGCCTGCG
CATCACCAGCACCACCCTCCTGGTCCTCGTCCTGTTCCTCCTCTGGAAGCACTGGGACTCCCTCACCTAC
CTCCTGGAGCACGTGTTGCTGCCCAGCTGA

Translation (709 aa):
MKRCRSDELQQQQGEEDGAGLEDAASHLPGADLRPGETTGANSAGGPTSDAGAAAAPNPGPRSKPPDLKK
IQQLSEGSMFGHGLKHLFHSRRRSREREHQTSQDSQQHQQQQGMSDHDSPDEKERSPEMHRVSYAMSLHD
LPARPTAFNRVLQQIRSRPSIKRGASLHSSSGGGSSGSSSRRTKSSSLEPQRGSPHLLRKAPQDSSLAAI
LHQHQCRPRSSSTTDTALLLADGSNVYLLAEEAEGIGDKVDKGDLVALSLPAGHGDTDGPISLDVPDGAP
DPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQL
HKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTA
VVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAG
SNSGAGPGGALGSPKSNALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKTQLQRDYTYMTQCLQEERY
RYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQ
LEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTTLLVLVLFLLWKHWDSLTY
LLEHVLLPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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