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Report for CCDS30983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30983.1 Public Homo sapiens 1 RBBP5 24 110 108 CCDS HistoryNCBI Gene:5929Re-query CCDS DB by CCDS ID:30983.1Re-query CCDS DB by GeneID:5929See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264515.11 ENSP00000264515.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264515.11Link to Ensembl Protein Viewer:ENSP00000264515.6Re-query CCDS DB by Nucleotide ID:ENST00000264515Re-query CCDS DB by Protein ID:ENSP00000264515
Original member Current member NCBI NM_005057.4 NP_005048.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005057.4Link to Protein Sequence:NP_005048.2Re-query CCDS DB by Nucleotide ID:NM_005057Re-query CCDS DB by Protein ID:NP_005048Link to BLAST:NP_005048.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005048.2 538 Q15291-1 538 100% 0 0

Chromosomal Locations for CCDS 30983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 205088787 205088815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205094873 205095064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205096682 205096911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205097326 205097395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205098989 205099106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205099741 205099812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205099911 205100064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205100152 205100271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205101600 205101709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205103857 205104019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205105028 205105168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205114789 205114961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205115858 205115883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205121855 205121873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGAACCTCGAGTTGCTGGAGTCCTTTGGGCAGAACTATCCAGAGGAAGCTGATGGAACTTTGGATTGTA
TCAGCATGGCTTTGACTTGCACCTTTAACAGGTGGGGCACACTGCTTGCAGTTGGCTGTAATGATGGCCG
AATTGTCATCTGGGATTTCTTGACAAGAGGCATTGCTAAAATAATTAGTGCACACATCCATCCAGTGTGT
TCTTTATGCTGGAGCCGAGATGGTCATAAACTCGTGAGTGCTTCCACTGATAACATAGTGTCACAGTGGG
ATGTTCTTTCAGGCGACTGTGACCAGAGGTTTCGATTCCCTTCACCCATCTTAAAAGTCCAATATCATCC
ACGAGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCC
AAACATGTTGTTCTGCCGGTGGACGATGACTCCGATTTGAACGTTGTGGCATCTTTTGATAGGCGAGGGG
AATATATTTATACGGGAAACGCAAAAGGCAAGATTTTGGTCCTAAAAACAGATTCTCAGGATCTTGTTGC
TTCCTTCAGAGTGACAACTGGAACAAGCAATACCACAGCCATTAAGTCAATTGAGTTTGCCCGGAAGGGG
AGTTGCTTTTTAATTAACACGGCAGATCGAATAATCAGAGTTTATGATGGCAGAGAAATCTTAACATGTG
GAAGAGATGGAGAGCCTGAACCTATGCAGAAATTGCAGGATTTGGTGAATAGGACCCCATGGAAGAAATG
TTGTTTCTCTGGGGATGGGGAATACATCGTGGCAGGTTCTGCCCGGCAGCATGCCCTGTACATCTGGGAG
AAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGGACGAGAGGAGAACTCCTCTTGGATGTAGCTTGGC
ATCCTGTTCGACCCATCATAGCATCCATTTCCAGTGGAGTGGTATCTATCTGGGCACAGAATCAAGTAGA
AAACTGGAGTGCATTTGCACCAGACTTCAAAGAATTGGATGAAAATGTAGAATACGAAGAAAGGGAATCA
GAGTTTGATATTGAAGATGAAGATAAGAGTGAGCCTGAGCAGACAGGGGCTGATGCTGCAGAAGATGAGG
AAGTGGATGTCACCAGCGTGGACCCTATTGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAA
GGCTCTATTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTACGGCCCCCCACCG
GATGCAGTCCAAACCTCCTTGATGGATGAAGGGGCTAGTTCAGAGAAGAAGAGGCAGTCCTCAGCAGATG
GGTCCCAGCCACCTAAGAAGAAACCCAAAACAACCAATATAGAACTTCAAGGAGTACCAAATGATGAAGT
CCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCA
AAAGGTAAAGAGAAAGATTCTCCATTTAAACCGAAACTCTACAAAGGGGACAGAGGTTTACCTCTGGAAG
GATCAGCGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGCCCTTGACAGCAGGAGGAGCAATCTCAGAACT
GTTATGA

Translation (538 aa):
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVC
SLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDS
KHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKG
SCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWE
KSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERES
EFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGS
KGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLTAGGAISELL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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