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Report for CCDS30912.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30912.1 Public Homo sapiens 1 FCRL6 24 110 108 CCDS HistoryNCBI Gene:343413Re-query CCDS DB by CCDS ID:30912.1Re-query CCDS DB by GeneID:343413See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30912.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368106.4 ENSP00000357086.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368106.4Link to Ensembl Protein Viewer:ENSP00000357086.3Re-query CCDS DB by Nucleotide ID:ENST00000368106Re-query CCDS DB by Protein ID:ENSP00000357086
Original member Current member NCBI NM_001004310.3 NP_001004310.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004310.3Link to Protein Sequence:NP_001004310.2Re-query CCDS DB by Nucleotide ID:NM_001004310Re-query CCDS DB by Protein ID:NP_001004310Link to BLAST:NP_001004310.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004310.2 434 Q6DN72-1 434 100% 0 0

Chromosomal Locations for CCDS 30912.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 159802425 159802455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159806596 159806616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159808178 159808444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159808961 159809245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159809402 159809683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159810094 159810216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159813489 159813554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159814221 159814292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159815428 159815459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159815536 159815661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1305 nt):
ATGCTGCTCTGGACGGCTGTGCTGCTCTTTGTTCCCTGTGTTGGGAAAACTGTCTGGCTGTACCTCCAAG
CCTGGCCAAACCCTGTGTTTGAAGGAGATGCCCTGACTCTGCGATGTCAGGGATGGAAGAATACACCACT
GTCTCAGGTGAAGTTCTACAGAGATGGAAAATTCCTTCATTTCTCTAAGGAAAACCAGACTCTGTCCATG
GGAGCAGCAACAGTGCAGAGCCGTGGCCAGTACAGCTGCTCTGGGCAGGTGATGTATATTCCACAGACAT
TCACACAAACTTCAGAGACTGCCATGGTTCAAGTCCAAGAGCTGTTTCCACCTCCTGTGCTGAGTGCCAT
CCCCTCTCCTGAGCCCCGAGAGGGTAGCCTGGTGACCCTGAGATGTCAGACAAAGCTGCACCCCCTGAGG
TCAGCCTTGAGGCTCCTTTTCTCCTTCCACAAGGACGGCCACACCTTGCAGGACAGGGGCCCTCACCCAG
AACTCTGCATCCCGGGAGCCAAGGAGGGAGACTCTGGGCTTTACTGGTGTGAGGTGGCCCCTGAGGGTGG
CCAGGTCCAGAAGCAGAGCCCCCAGCTGGAGGTCAGAGTGCAGGCTCCTGTATCCCGTCCTGTGCTCACT
CTGCACCACGGGCCTGCTGACCCTGCTGTGGGGGACATGGTGCAGCTCCTCTGTGAGGCACAGAGGGGCT
CCCCTCCGATCCTGTATTCCTTCTACCTTGATGAGAAGATTGTGGGGAACCACTCAGCTCCCTGTGGTGG
AACCACCTCCCTCCTCTTCCCAGTGAAGTCAGAACAGGATGCTGGGAACTACTCCTGCGAGGCTGAGAAC
AGTGTCTCCAGAGAGAGGAGTGAGCCCAAGAAGCTGTCTCTGAAGGGTTCTCAAGTCTTGTTCACTCCCG
CCAGCAACTGGCTGGTTCCTTGGCTTCCTGCGAGCCTGCTTGGCCTGATGGTTATTGCTGCTGCACTTCT
GGTTTATGTGAGATCCTGGAGAAAAGCTGGGCCCCTTCCATCCCAGATACCACCCACAGCTCCAGGTGGA
GAGCAGTGCCCACTATATGCCAACGTGCATCACCAGAAAGGGAAAGATGAAGGTGTTGTCTACTCTGTGG
TGCATAGAACCTCAAAGAGGAGTGAAGCCAGGTCTGCTGAGTTCACCGTGGGGAGAAAGGACAGTTCTAT
CATCTGTGCGGAGGTGAGATGCCTGCAGCCCAGTGAGGTTTCATCCACGGAGGTGAATATGAGAAGCAGG
ACTCTCCAAGAACCCCTTAGCGACTGTGAGGAGGTTCTCTGCTAG

Translation (434 aa):
MLLWTAVLLFVPCVGKTVWLYLQAWPNPVFEGDALTLRCQGWKNTPLSQVKFYRDGKFLHFSKENQTLSM
GAATVQSRGQYSCSGQVMYIPQTFTQTSETAMVQVQELFPPPVLSAIPSPEPREGSLVTLRCQTKLHPLR
SALRLLFSFHKDGHTLQDRGPHPELCIPGAKEGDSGLYWCEVAPEGGQVQKQSPQLEVRVQAPVSRPVLT
LHHGPADPAVGDMVQLLCEAQRGSPPILYSFYLDEKIVGNHSAPCGGTTSLLFPVKSEQDAGNYSCEAEN
SVSRERSEPKKLSLKGSQVLFTPASNWLVPWLPASLLGLMVIAAALLVYVRSWRKAGPLPSQIPPTAPGG
EQCPLYANVHHQKGKDEGVVYSVVHRTSKRSEARSAEFTVGRKDSSIICAEVRCLQPSEVSSTEVNMRSR
TLQEPLSDCEEVLC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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