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Report for CCDS30908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30908.1 Public Homo sapiens 1 PYHIN1 24 110 108 CCDS HistoryNCBI Gene:149628Re-query CCDS DB by CCDS ID:30908.1Re-query CCDS DB by GeneID:149628See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30908.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392252.7 ENSP00000376082.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392252.7Link to Ensembl Protein Viewer:ENSP00000376082.3Re-query CCDS DB by Nucleotide ID:ENST00000392252Re-query CCDS DB by Protein ID:ENSP00000376082
Original member Current member NCBI NM_198930.4 NP_945148.1 Accepted alive Link to Nucleotide Sequence:NM_198930.4Link to Protein Sequence:NP_945148.1Re-query CCDS DB by Nucleotide ID:NM_198930Re-query CCDS DB by Protein ID:NP_945148Link to BLAST:NP_945148.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_945148.1 452 Q6K0P9-4 452 100% 0 0

Chromosomal Locations for CCDS 30908.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 158936911 158937175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 158938424 158938542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 158939080 158939247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 158941977 158942399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 158943790 158943978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 158944875 158945042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 158976701 158976727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGCAAATAACTACAAGAAAATTGTTCTACTGAAAGGATTAGAGGTCATCAATGATTATCATTTTAGAA
TTGTTAAGTCCTTACTGAGTAACGATTTAAAACTTAATCCAAAAATGAAAGAAGAGTATGACAAAATTCA
GATTGCTGACTTGATGGAGGAAAAGTTCCCAGGTGATGCCGGTTTGGGCAAACTAATAGAATTCTTCAAA
GAAATACCAACACTGGGAGACCTTGCTGAAACTCTTAAAAGAGAAAAGTTAAAAGTCAAAGGAATAATCC
CATCTAAAAAGACGAAACAGAAAGAAGTGTATCCTGCTACACCTGCATGCACCCCAAGCAACCGTCTCAC
AGCTAAAGGAGCAGAGGAGACTCTTGGACCTCAGAAAAGAAAAAAACCATCTGAAGAAGAGACTGGAACC
AAAAGGAGTAAGATGTCCAAAGAGCAGACTCGGCCTTCCTGCTCTGCAGGAGCCAGCACGTCCACAGCCA
TGGGCCGTTCCCCACCTCCCCAGACCTCATCATCAGCTCCACCCAACACTTCCTCAACTGAGAGCCTAAA
ACCATTGGCCAACCGTCACGCAACTGCCAGTAAAAATATTTTCCGAGAAGACCCAATAATCGCGATGGTA
CTAAATGCAACAAAAGTATTTAAATATGAATCCTCAGAAAATGAGCAAAGAAGAATGTTTCATGCTACAG
TGGCTACGCAGACACAGTTCTTTCATGTGAAGGTTTTAAACATCAACTTGAAGAGGAAATTCATTAAAAA
GAGAATCATCATTATATCAAATTATTCCAAACGTAATAGTCTCCTAGAGGTGAATGAAGCCTCTTCTGTA
TCTGAAGCTGGTCCTGACCAAACGTTTGAGGTTCCAAAGGACATCATCAGAAGAGCAAAGAAAATTCCGA
AGATCAATATTCTTCACAAACAAACTTCAGGATATATTGTATATGGATTATTTATGCTACATACGAAAAT
TGTAAATAGGAAGACGACAATCTATGAAATTCAGGATAAAACAGGAAGTATGGCTGTAGTAGGAAAAGGA
GAATGCCACAATATCCCCTGTGAAAAAGGAGATAAGCTTCGACTCTTCTGCTTTCGACTGAGAAAGAGGG
AAAATATGTCAAAACTGATGTCAGAAATGCATAGTTTCATCCAGATACAGAAAAATACAAACCAGAGAAG
CCATGACTCCAGGAGCATGGCACTACCCCAGGAACAGAGTCAGCATCCAAAACCTTCAGAGGCCAGCACA
ACCCTACCTGAAAGCCATCTCAAGACTCCTCAGATGCCACCAACAACCCCATCCAGCAGTTCCTTCACCA
AGGTCACCAAGGACAAGGATATCAAATAA

Translation (452 aa):
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDAGLGKLIEFFK
EIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGT
KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMV
LNATKVFKYESSENEQRRMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSV
SEAGPDQTFEVPKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKG
ECHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST
TLPESHLKTPQMPPTTPSSSSFTKVTKDKDIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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