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Report for CCDS30666.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30666.1 Public Homo sapiens 1 S100PBP 24 110 108 CCDS HistoryNCBI Gene:64766Re-query CCDS DB by CCDS ID:30666.1Re-query CCDS DB by GeneID:64766See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30666.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373475.10 ENSP00000362574.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373475.10Link to Ensembl Protein Viewer:ENSP00000362574.5Re-query CCDS DB by Nucleotide ID:ENST00000373475Re-query CCDS DB by Protein ID:ENSP00000362574
Original member Current member EBI ENST00000373476.5 ENSP00000362575.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373476.5Link to Ensembl Protein Viewer:ENSP00000362575.1Re-query CCDS DB by Nucleotide ID:ENST00000373476Re-query CCDS DB by Protein ID:ENSP00000362575
Original member Current member NCBI NM_001256121.2 NP_001243050.1 Accepted alive Link to Nucleotide Sequence:NM_001256121.2Link to Protein Sequence:NP_001243050.1Re-query CCDS DB by Nucleotide ID:NM_001256121Re-query CCDS DB by Protein ID:NP_001243050Link to BLAST:NP_001243050.1
Original member Current member NCBI NM_022753.4 NP_073590.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022753.4Link to Protein Sequence:NP_073590.2Re-query CCDS DB by Nucleotide ID:NM_022753Re-query CCDS DB by Protein ID:NP_073590Link to BLAST:NP_073590.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243050.1 408 Q96BU1-1 408 100% 0 0
NP_073590.2 408 Q96BU1-1 408 100% 0 0

Chromosomal Locations for CCDS 30666.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32826100 32826930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32827993 32828081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32829964 32830067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32853079 32853166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32855924 32856038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGATGTGCTCACGGGTGCCCTCTGAACAGTCTTCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCAT
TTTCTTGGGATTCCTTGGATGAGGATGGATTGGATGACTCCTTGCTGGAGCTGTCAGAGGGAGAAGAAGA
TGATGGTGATGTAAATTACACAGAGGAAGAGATTGATGCACTGTTGAAGGAAGATGACCCATCATATGAG
CAGTCTTCTGGGGAAGATGATGGTGGGCATGTTGAGAAGGGAGAAAGAGGGAGTCAAATTCTACTTGATA
CTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAGTAGCTGAGACTCCTGACCTCTTCAAACTACC
TCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATACTAAACCATTAAACAGACGCTCTGTACTAGAA
AAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCAACAGTTTGTGATGCTCTGCTTGATAAGGACG
AGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAGAAGATGGTCTTAG
CCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGGAATGGGCCC
CAGCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTGATAAAAATATGCCTGACAGTGAGAACC
CTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATGG
TGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAACAAACAGGATGTT
CTTAACAAGGATTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAA
CTAAGACCAGGACTAATGTTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGAAGCAGCTTTATCTCAG
GAGTGTCATTGCTCATATAGAAGACCCAGAGGACACTAACCAAGGTATCTCGGGGGAGCTTTGTGCCTTG
ATGGATCAAGTTCATCATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGCGAAACTACG
CCCGCCGACAGAAACATCTGCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAACATGCGAAGCCACCA
TCGGTTCCAGCGTCTCCCAGACTTCTCGTACAGTTAA

Translation (408 aa):
MMCSRVPSEQSSGTSLLPKDGAPFSWDSLDEDGLDDSLLELSEGEEDDGDVNYTEEEIDALLKEDDPSYE
QSSGEDDGGHVEKGERGSQILLDTPREKNSSYSLGPVAETPDLFKLPQLSTSSGHGPAHTKPLNRRSVLE
KNLIKVTVAPFNPTVCDALLDKDETDSSKDTEKLSSLGEEMREDGLSPNESKLCTESEGISPNNSAWNGP
QLSSSNNNFQQTVSDKNMPDSENPTSVFSRISDHSETPNMELSCRNGGSHKSSCEMRSLVVSTSSNKQDV
LNKDSGKMKGHERRLGKVIPVLQTKTRTNVPTFSQSNLEQQKQLYLRSVIAHIEDPEDTNQGISGELCAL
MDQVHHMQHSKWQHPSDLTTRNYARRQKHLQRYSLTQWVDRNMRSHHRFQRLPDFSYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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