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Report for CCDS30664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30664.1 Public Homo sapiens 1 ZBTB8A 24 110 108 CCDS HistoryNCBI Gene:653121Re-query CCDS DB by CCDS ID:30664.1Re-query CCDS DB by GeneID:653121See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30664.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373510.9 ENSP00000362609.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373510.9Link to Ensembl Protein Viewer:ENSP00000362609.3Re-query CCDS DB by Nucleotide ID:ENST00000373510Re-query CCDS DB by Protein ID:ENSP00000362609
Original member Current member NCBI NM_001040441.3 NP_001035531.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040441.3Link to Protein Sequence:NP_001035531.2Re-query CCDS DB by Nucleotide ID:NM_001040441Re-query CCDS DB by Protein ID:NP_001035531Link to BLAST:NP_001035531.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035531.2 441 Q96BR9-1 441 100% 0 0

Chromosomal Locations for CCDS 30664.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32592932 32593754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32595054 32595223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32600087 32600419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1326 nt):
ATGGAGATCTCCTCTCATCAGTCTCACCTCCTGCAGCAACTGAACGAGCAGCGCAGGCAAGATGTATTTT
GTGACTGCAGTATTCTAGTTGAAGGGAAGGTCTTCAAAGCACATCGAAATGTATTATTCGCTAGTAGCGG
CTACTTTAAAATGCTTCTTTCTCAGAATTCAAAGGAGACGAGTCAGCCAACCACAGCTACATTTCAGGCT
TTCTCCCCTGACACTTTTACAGTTATCTTGGACTTCGTATATTCTGGCAAACTGTCTCTTACTGGTCAGA
ATGTCATAGAAGTGATGTCGGCTGCTAGCTTCCTTCAGATGACTGATGTCATAAGTGTATGTAAGACTTT
TATTAAATCTTCCTTAGACATTAGTGAGAAAGAAAAAGATCGCTATTTCAGTCTCTCAGATAAAGATGCC
AATTCTAATGGTGTAGAACGTTCCTCTTTTTATAGTGGTGGCTGGCAAGAAGGAAGCAGTTCTCCACGTT
CTCACCTAAGCCCAGAGCAAGGAACAGGTATAATAAGTGGAAAATCTTGGAATAAGTATAATTATCATCC
AGCCTCCCAGAAGAATACTCAACAACCCTTGGCCAAGCATGAACCAAGGAAAGAGTCCATTAAAAAGACC
AAACATTTGAGATTGTCACAGCCTTCTGAAGTTACTCATTATAAGTCAAGCAAACGAGAAGTACGAACAT
CTGATTCTTCCAGCCATGTTTCCCAGTCTGAAGAACAAGCACAGATTGATGCTGAAATGGACTCTACTCC
TGTTGGCTATCAGTACGGTCAAGGATCTGATGTCACATCCAAAAGCTTTCCAGATGATCTGCCTCGGATG
CGATTCAAGTGCCCGTACTGCACACATGTGGTGAAGCGGAAGGCAGACCTAAAGCGCCACCTTCGTTGTC
ATACAGGAGAAAGGCCCTATCCATGTCAAGCTTGTGGAAAAAGATTTAGCAGGCTAGACCATCTAAGTAG
CCATTTTCGAACAATTCACCAGGCATGTAAACTCATCTGCAGAAAATGTAAACGTCATGTGACAGATCTA
ACAGGGCAAGTGGTACAGGAGGGAACCAGGCGCTACAGACTGTGTAATGAGTGTCTTGCAGAATTTGGCA
TAGACAGCCTCCCCATTGACTTGGAAGCTGAACAACATCTTATGTCCCCATCAGATGGAGATAAGGATTC
CAGATGGCACTTGAGTGAAGATGAGAATAGATCCTATGTGGAGATTGTAGAAGATGGGTCTGCTGATCTG
GTCATCCAACAGGTTGATGATAGTGAAGAAGAAGAAGAAAAAGAAATTAAGCCCAACATTAGGTAG

Translation (441 aa):
MEISSHQSHLLQQLNEQRRQDVFCDCSILVEGKVFKAHRNVLFASSGYFKMLLSQNSKETSQPTTATFQA
FSPDTFTVILDFVYSGKLSLTGQNVIEVMSAASFLQMTDVISVCKTFIKSSLDISEKEKDRYFSLSDKDA
NSNGVERSSFYSGGWQEGSSSPRSHLSPEQGTGIISGKSWNKYNYHPASQKNTQQPLAKHEPRKESIKKT
KHLRLSQPSEVTHYKSSKREVRTSDSSSHVSQSEEQAQIDAEMDSTPVGYQYGQGSDVTSKSFPDDLPRM
RFKCPYCTHVVKRKADLKRHLRCHTGERPYPCQACGKRFSRLDHLSSHFRTIHQACKLICRKCKRHVTDL
TGQVVQEGTRRYRLCNECLAEFGIDSLPIDLEAEQHLMSPSDGDKDSRWHLSEDENRSYVEIVEDGSADL
VIQQVDDSEEEEEKEIKPNIR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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