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Report for CCDS3055.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3055.1 Public Homo sapiens 3 GP9 24 110 108 CCDS HistoryNCBI Gene:2815Re-query CCDS DB by CCDS ID:3055.1Re-query CCDS DB by GeneID:2815See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3055.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307395.5 ENSP00000303942.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307395.5Link to Ensembl Protein Viewer:ENSP00000303942.4Re-query CCDS DB by Nucleotide ID:ENST00000307395Re-query CCDS DB by Protein ID:ENSP00000303942
Original member Current member NCBI NM_000174.5 NP_000165.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000174.5Link to Protein Sequence:NP_000165.1Re-query CCDS DB by Nucleotide ID:NM_000174Re-query CCDS DB by Protein ID:NP_000165Link to BLAST:NP_000165.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000165.1 177 P14770 177 100% 0 0

Chromosomal Locations for CCDS 3055.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 129061740 129062273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGCCTGCCTGGGGAGCCCTGTTCCTGCTCTGGGCCACAGCAGAGGCCACCAAGGACTGCCCCAGCCCAT
GTACCTGCCGCGCCCTGGAAACCATGGGGCTGTGGGTGGACTGCAGGGGCCACGGACTCACGGCCCTGCC
TGCCCTGCCGGCCCGCACCCGCCACCTTCTGCTGGCCAACAACAGCCTTCAGTCCGTGCCCCCGGGAGCC
TTTGACCACCTGCCCCAGCTGCAGACCCTCGATGTGACGCAGAACCCCTGGCACTGTGACTGCAGCCTCA
CCTATCTGCGCCTCTGGCTGGAGGACCGCACGCCCGAGGCCCTGCTGCAGGTCCGCTGTGCCAGCCCCAG
CCTCGCTGCCCATGGCCCGCTGGGCCGGCTGACAGGCTACCAGCTGGGCAGCTGTGGCTGGCAGCTGCAG
GCGTCCTGGGTGCGCCCGGGGGTCTTGTGGGACGTGGCGCTGGTCGCCGTGGCCGCGCTGGGCCTGGCTC
TTCTGGCTGGCCTGCTGTGTGCCACCACAGAGGCCCTGGATTGA

Translation (177 aa):
MPAWGALFLLWATAEATKDCPSPCTCRALETMGLWVDCRGHGLTALPALPARTRHLLLANNSLQSVPPGA
FDHLPQLQTLDVTQNPWHCDCSLTYLRLWLEDRTPEALLQVRCASPSLAAHGPLGRLTGYQLGSCGWQLQ
ASWVRPGVLWDVALVAVAALGLALLAGLLCATTEALD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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