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Report for CCDS30512.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30512.1 Public Mus musculus X Grpr 23 108 98 CCDS HistoryNCBI Gene:14829Re-query CCDS DB by CCDS ID:30512.1Re-query CCDS DB by GeneID:14829See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30512.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033730.2 ENSMUSP00000033730.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033730.2Link to Ensembl Protein Viewer:ENSMUSP00000033730.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000033730Re-query CCDS DB by Protein ID:ENSMUSP00000033730
Original member Current member NCBI NM_008177.3 NP_032203.1 Accepted alive Link to Nucleotide Sequence:NM_008177.3Link to Protein Sequence:NP_032203.1Re-query CCDS DB by Nucleotide ID:NM_008177Re-query CCDS DB by Protein ID:NP_032203Link to BLAST:NP_032203.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032203.1 384 P21729 384 100% 0 0

Chromosomal Locations for CCDS 30512.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 163514892 163515278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 163517071 163517422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 163548882 163549297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGGCTCCAAATAATTGTTCCCACCTGAACTTGGACGTGGACCCTTTCCTGTCCTGCAACGACACCTTCA
ATCAAAGTCTGAGTCCCCCCAAGATGGACAACTGGTTTCACCCGGGCTTCATCTATGTCATCCCTGCAGT
TTATGGGCTTATCATCGTGATAGGTCTTATTGGCAACATCACGCTCATCAAGATCTTCTGCACGGTCAAG
TCCATGCGAAACGTGCCAAACCTGTTCATCTCTAGCCTGGCTTTGGGAGACCTGCTGCTGCTGGTGACAT
GCGCCCCTGTGGATGCCAGCAAGTACCTGGCTGACAGGTGGCTATTTGGCAGAATTGGCTGCAAACTGAT
CCCCTTTATACAACTTACTTCAGTGGGGGTGTCTGTCTTCACACTTACGGCACTGTCAGCTGACAGGTAC
AAAGCCATTGTACGGCCAATGGATATCCAGGCATCCCATGCCCTGATGAAGATCTGTCTCAAAGCTGCTT
TGATCTGGATTGTCTCTATGTTGTTGGCCATCCCAGAGGCTGTGTTTTCTGACCTCCACCCCTTCCATGT
GAAAGATACCAACCAAACCTTCATTAGTTGTGCCCCCTACCCACACTCCAATGAGCTACACCCTAAAATC
CATTCCATGGCTTCCTTTCTGGTTTTCTACGTTATCCCACTGGCGATCATCTCTGTCTACTACTACTTCA
TTGCCCGAAATCTGATTCAGAGTGCCTACAATCTTCCCGTGGAAGGCAATATACATGTCAAGAAGCAGAT
CGAATCCCGGAAGCGGCTTGCCAAGACAGTACTGGTGTTTGTGGGCCTCTTTGCCTTCTGCTGGCTCCCC
AACCATGTCATCTACCTGTACCGTTCCTACCACTACTCTGAAGTGGACACCTCCATGCTCCACTTTGTCA
CCAGCATCTGTGCCCGCCTCCTGGCCTTCACCAACTCCTGTGTGAACCCCTTTGCTCTTTATCTGCTGAG
CAAGAGCTTCAGGAAGCAGTTCAACACTCAACTTCTCTGCTGCCAGCCTGGCCTGATGAACAGGTCCCAC
AGCACAGGCAGAAGTACCACCTGCATGACCTCCTTCAAGAGCACTAACCCCTCGGCTACCTTTAGCCTCA
TCAACAGAAATATCTGTCATGAGGGGTATGTCTAG

Translation (384 aa):
MAPNNCSHLNLDVDPFLSCNDTFNQSLSPPKMDNWFHPGFIYVIPAVYGLIIVIGLIGNITLIKIFCTVK
SMRNVPNLFISSLALGDLLLLVTCAPVDASKYLADRWLFGRIGCKLIPFIQLTSVGVSVFTLTALSADRY
KAIVRPMDIQASHALMKICLKAALIWIVSMLLAIPEAVFSDLHPFHVKDTNQTFISCAPYPHSNELHPKI
HSMASFLVFYVIPLAIISVYYYFIARNLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLP
NHVIYLYRSYHYSEVDTSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLMNRSH
STGRSTTCMTSFKSTNPSATFSLINRNICHEGYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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