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Report for CCDS3045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3045.1 Public Homo sapiens 3 ABTB1 24 110 108 CCDS HistoryNCBI Gene:80325Re-query CCDS DB by CCDS ID:3045.1Re-query CCDS DB by GeneID:80325See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000232744.13 ENSP00000232744.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000232744.13Link to Ensembl Protein Viewer:ENSP00000232744.8Re-query CCDS DB by Nucleotide ID:ENST00000232744Re-query CCDS DB by Protein ID:ENSP00000232744
Original member Current member NCBI NM_172027.3 NP_742024.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_172027.3Link to Protein Sequence:NP_742024.1Re-query CCDS DB by Nucleotide ID:NM_172027Re-query CCDS DB by Protein ID:NP_742024Link to BLAST:NP_742024.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_742024.1 478 Q969K4-1 478 100% 0 0

Chromosomal Locations for CCDS 3045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 127673026 127673081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127674391 127674453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127674545 127674600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127675970 127676114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127676272 127676431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127676536 127676581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127676967 127677083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127677168 127677286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127677465 127677563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127677676 127677843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127679985 127680185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 127680269 127680475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGGACACCAGCGACCTGTTCGCCAGCTGCAGGAAGGGGGATGTGGGCCGAGTGCGGTACCTGCTGGAGC
AGCGAGACGTGGAGGTGAATGTGCGGGACAAGTGGGACAGCACCCCCTTGTACTATGCCTGCTTGTGTGG
GCACGAGGAGCTGGTACTCTACCTTCTGGCCAATGGAGCCCGCTGCGAGGCCAACACCTTCGATGGTGAG
CGCTGCCTCTATGGGGCACTGAGTGACCCCATCCGCCGGGCTCTACGCGATTACAAGCAGGTCACGGCTT
CCTGCAGGAGGCGGGATTACTATGACGACTTCTTGCAGCGGCTTCTAGAGCAGGGCATCCACAGTGACGT
GGTCTTTGTAGTACACGGGAAGCCATTCCGGGTGCATCGCTGCGTCCTGGGTGCACGTAGTGCCTACTTT
GCCAACATGCTGGACACCAAATGGAAGGGCAAGAGTGTCGTGGTTCTCAGGCACCCACTGATCAACCCCG
TGGCCTTTGGGGCCCTGCTGCAGTACCTGTACACAGGCCGCCTGGACATTGGCGTAGAGCATGTGAGTGA
CTGTGAGCGCCTGGCCAAGCAATGCCAGCTGTGGGACCTGCTCAGCGACCTGGAGGCCAAGTGCGAGAAG
GTGTCTGAGTTTGTGGCGTCTAAGCCAGGCACGTGTGTGAAGGTGCTGACCATCGAGCCCCCACCTGCAG
ACCCCCGCCTCCGGGAGGACATGGCGCTGCTGGCCGATTGTGCCCTGCCCCCCGAGCTCCGAGGTGATCT
TTGGGAGCTGCCCTTCCCTTGTCCTGACGGCTTCAACAGCTGCCCTGACATCTGCTTCCGAGTGGCTGGC
TGCAGCTTCCTCTGCCACAAGGCCTTTTTCTGTGGCCGCAGTGACTACTTCCGAGCCCTGCTGGATGACC
ACTTCCGAGAGAGCGAGGAGCCAGCGACCTCAGGGGGCCCCCCAGCCGTCACCCTGCATGGCATCTCACC
CGACGTCTTCACTCACGTGCTCTACTACATGTACAGCGACCACACTGAGCTGTCCCCCGAGGCAGCCTAT
GATGTGCTGAGCGTCGCCGACATGTACCTGCTGCCAGGCCTGAAGAGGCTGTGCGGCCGCAGCCTGGCTC
AGATGCTAGACGAGGACACTGTGGTGGGTGTGTGGCGCGTGGCCAAGCTCTTCCGCCTGGCGCGGCTTGA
GGACCAGTGCACTGAGTACATGGCCAAGGTCATTGAGAAGCTGGTGGAGCGGGAGGACTTCGTGGAGGCG
GTGAAGGAGGAGGCAGCGGCTGTGGCAGCCCGGCAGGAGACGGACTCTATCCCGCTGGTGGACGACATCC
GCTTCCACGTGGCCAGCACGGTGCAGACCTACAGCGCCATAGAGGAGGCGCAGCAGCGTCTGCGGGCACT
CGAGGACCTGCTCGTGTCCATCGGTCTGGACTGTTGA

Translation (478 aa):
MDTSDLFASCRKGDVGRVRYLLEQRDVEVNVRDKWDSTPLYYACLCGHEELVLYLLANGARCEANTFDGE
RCLYGALSDPIRRALRDYKQVTASCRRRDYYDDFLQRLLEQGIHSDVVFVVHGKPFRVHRCVLGARSAYF
ANMLDTKWKGKSVVVLRHPLINPVAFGALLQYLYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLEAKCEK
VSEFVASKPGTCVKVLTIEPPPADPRLREDMALLADCALPPELRGDLWELPFPCPDGFNSCPDICFRVAG
CSFLCHKAFFCGRSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEAAY
DVLSVADMYLLPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFRLARLEDQCTEYMAKVIEKLVEREDFVEA
VKEEAAAVAARQETDSIPLVDDIRFHVASTVQTYSAIEEAQQRLRALEDLLVSIGLDC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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