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Report for CCDS29722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29722.1 Public Mus musculus 19 Kcnv2 23 108 98 CCDS HistoryNCBI Gene:240595Re-query CCDS DB by CCDS ID:29722.1Re-query CCDS DB by GeneID:240595See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29722.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056708.3 ENSMUSP00000055091.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056708.3Link to Ensembl Protein Viewer:ENSMUSP00000055091.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000056708Re-query CCDS DB by Protein ID:ENSMUSP00000055091
Original member Current member NCBI NM_183179.1 NP_899002.1 Accepted alive Link to Nucleotide Sequence:NM_183179.1Link to Protein Sequence:NP_899002.1Re-query CCDS DB by Nucleotide ID:NM_183179Re-query CCDS DB by Protein ID:NP_899002Link to BLAST:NP_899002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_899002.1 562 Q8CFS6 562 100% 0 0

Chromosomal Locations for CCDS 29722.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 27322751 27324157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 27333642 27333923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1689 nt):
ATGCTGAAACAGAGCAACGAGAGGAGATGGTCCTTGAGCTACAAGCCCTGGAGTACCCCAGAGACTGAGG
ATGTGCCCAACACTGGGAGCAACCAACACCGCAGGAGCATCTGCTCCTTGGGAGCCCGCACTGGCTCTCA
GGCCAGCATCGCACCACAATGGACCGAGGGCAACTACAATTACTACATTGAGGAAGATGAGGACTGCGGG
GAGGAGGGGGAGGACTGGAAGGATGATCTTGCCGAAGAGAATCAGAAGGCGGAGTGCCTCACAAGCCTCC
TGGATGGCCACAACGATACTCCAGCCCAAATGTCCACGCTGAAAGTGAACGTAGGCGGCCACAGCTATCT
GCTGGAATGCTGTGAGCTGGCCAACTACCCCAAAACGCGCCTGGGTCGCCTGGCCACCTCCACCACTCGC
AGAGGCCAGCTGGGCCTGTGTGATGACTACGAGGCACAGACAGACGAGTACTTCTTTGACCGTGACCCAG
CGGTCTTCCAGCTCATCTACAACTTCTACACATCCGGGGTGTTGCTGGTGCGAGACGAGCTGTGTCCACG
CAGCTTTCTCGAGGAGCTGGGCTACTGGGGAGTGAGGCTCAAATACACGCCACGCTGCTGTCGCATCTGC
TTCGAGGAGCGGAGGGATGAACTGAGCGAGCAACTGAAGATCCAAAGGGAGCTGCGCGCGCAGGCGCAGG
CCGAGGAGGCCGAGGAGCTCTTTCGGGACATGCGCTTCTATGGACCACAACGTCAACGCCTCTGGAACCT
CATGGAGAAGCCCTTTTCCTCTGTGGCCGCCAAGGCCATGGGGGTGGCCACCAACCTCTTCGTGCTCATC
TCCGTGGTGGCCCTGGCGCTCAACACGGTGGAGGAGATGCAGCACCAGGCGGAGCAGGGCACAGGTGGTG
GGGACCCCAGGCCCATCTTGGAGCACGTGGAGATGCTGTGCGTGGCTTTCTTCACTCTGGAGTTCCTGCT
GCGCCTCGCCTCCACCCCTAACCTGCAGCGCTTTGCACGCAGCGCCCTCAACCTAGTGGACCTGGTGGCC
ATTCTGCCTTTCTACCTGCAGCTGCTGCTCGAGTGCTTCACGAGCGAGGACCAGAGGCACAACAAGGACT
CCCCACGAGAACACGACCTGGAGACCGTGGGCCGAGTGGGCAAGGTAGGCCAGGTGCTGCGCATCATGCG
CCTCATGCGCATCTTCCGAATCCTCAAGCTGGCTCGCCACTCCACAGGGCTGCGGGCCTTTGGCTTCACC
CTGCGCCAGTGCTACCAGCAGGTGGGCTGCCTGATGCTCTTCATCACTATGGGCATCTTCTCCTTCTCTG
CAGCTGTCTACTCGGTGGAGCACGACGTGCCTGGTACCAACTTCACCAGCATCCTCCATGCCTGGTGGTG
GGCCGCGGTAAGCATCTCCACCGTGGGCTATGGAGACATGTACCCGGAGACCCACCTGGGCAGGCTTTTT
GCCTTCCTCTGCATCGCTTTTGGCATTATTCTCAATGGGATGCCCATTTCCATCCTCTACAACAAGTTCT
CCGATTACTACAGCAAGCTCAAAGCTTACGAGTACACCGCCATCCGGAGGGAACGAGGAAAGGTCAACTT
TATGCAGAGAGCCACAAAGAAAATGGCTGAATGTTTATCTGAAAGTCATGCACAGTCCACCACAAGGCAA
GAGAATTAA

Translation (562 aa):
MLKQSNERRWSLSYKPWSTPETEDVPNTGSNQHRRSICSLGARTGSQASIAPQWTEGNYNYYIEEDEDCG
EEGEDWKDDLAEENQKAECLTSLLDGHNDTPAQMSTLKVNVGGHSYLLECCELANYPKTRLGRLATSTTR
RGQLGLCDDYEAQTDEYFFDRDPAVFQLIYNFYTSGVLLVRDELCPRSFLEELGYWGVRLKYTPRCCRIC
FEERRDELSEQLKIQRELRAQAQAEEAEELFRDMRFYGPQRQRLWNLMEKPFSSVAAKAMGVATNLFVLI
SVVALALNTVEEMQHQAEQGTGGGDPRPILEHVEMLCVAFFTLEFLLRLASTPNLQRFARSALNLVDLVA
ILPFYLQLLLECFTSEDQRHNKDSPREHDLETVGRVGKVGQVLRIMRLMRIFRILKLARHSTGLRAFGFT
LRQCYQQVGCLMLFITMGIFSFSAAVYSVEHDVPGTNFTSILHAWWWAAVSISTVGYGDMYPETHLGRLF
AFLCIAFGIILNGMPISILYNKFSDYYSKLKAYEYTAIRRERGKVNFMQRATKKMAECLSESHAQSTTRQ
EN


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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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