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Report for CCDS29634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29634.1 Public Mus musculus 19 Or5b94 23 108 98 CCDS HistoryNCBI Gene:258692Re-query CCDS DB by CCDS ID:29634.1Re-query CCDS DB by GeneID:258692See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29634.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057924.2 ENSMUSP00000050632.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057924.2Link to Ensembl Protein Viewer:ENSMUSP00000050632.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000057924Re-query CCDS DB by Protein ID:ENSMUSP00000050632
Original member Current member EBI ENSMUST00000208657.2 ENSMUSP00000146650.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208657.2Link to Ensembl Protein Viewer:ENSMUSP00000146650.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000208657Re-query CCDS DB by Protein ID:ENSMUSP00000146650
Original member Current member EBI ENSMUST00000208494.2 ENSMUSP00000146803.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208494.2Link to Ensembl Protein Viewer:ENSMUSP00000146803.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208494Re-query CCDS DB by Protein ID:ENSMUSP00000146803
Original member Current member EBI ENSMUST00000207341.2 ENSMUSP00000147051.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207341.2Link to Ensembl Protein Viewer:ENSMUSP00000147051.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000207341Re-query CCDS DB by Protein ID:ENSMUSP00000147051
Original member Current member NCBI NM_146697.2 NP_666908.2 Accepted alive Link to Nucleotide Sequence:NM_146697.2Link to Protein Sequence:NP_666908.2Re-query CCDS DB by Nucleotide ID:NM_146697Re-query CCDS DB by Protein ID:NP_666908Link to BLAST:NP_666908.2

Chromosomal Locations for CCDS 29634.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12674207 12675145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAGAACAGAACAGAGATGACAGGGTTCATCCTCCTAGGACTGACGAACGCACCAGAACTGAGGGCCC
CTCTGTTTATCATAATCAGCTTTATCTATTTCACCAATGTGATTGGAAACTTGGGAATGATTGTGCTGAT
TCTCTGGGATTCTCGACTCCACACTCCCATGTACTGTTTTCTTGCTAACCTGTCTCTGGTGGACATCTTT
TACTCCTCAGCTGTAGCTCCAACAATTTTGGCTGGACTTCTTGTAGGAAACATAGTTGTCTCCTACAATG
CCTGTGTTGCTCAGATGATCTCATTCTCAGCCTTTGTCACTACAGAAGATTTACTTTTGGCTGCAATGGC
CTATGATCGCTATGCAGCAGTGTGCAAACCCCTGCATTATACCACCATCATGACTCCAACTGTGTGTATA
TGTCTGATAATGGCCTGCTATACTGGTGGTTTCCTGAATTCCTCCATCCACACTGGGGACACATTCAGGC
TTTCATTTTGTGGATCCAATGCAGTTCATCACTTTTTCTGTGATGTTCCAGCAGTCATGACTCTCTCCTG
TTCTGATAGACATGTTAGTGAGATAGTACTCATTTATGGAGCAGGCTTCATTATCTGTTCTGCACTCCTT
GTTATTTTGATATCTTATACATTCATTTTTATCACCATCTTCAGGATGCGCTCAGCTGCAGGATACCAGA
AGGCTATGTCTACCTGTGTTTCTCACTTCACTGCTGTCTCCATTTTCTACGGGACTGTTATTTTCATGTA
CTTACAACCCACCTCCAGCCACTCCATGGACACTGATAAAACCGTGTCTGTGTTCTACACCATGGTCATC
CCCATGCTTAACCCTATGGTTTACAGTCTAAGGAACAAGGAGGTGAAAAGTGCATTCAAGAAAGTTGTGG
AGAAAGCAAAGTATTCCTTAGGATTTTAA

Translation (312 aa):
MENRTEMTGFILLGLTNAPELRAPLFIIISFIYFTNVIGNLGMIVLILWDSRLHTPMYCFLANLSLVDIF
YSSAVAPTILAGLLVGNIVVSYNACVAQMISFSAFVTTEDLLLAAMAYDRYAAVCKPLHYTTIMTPTVCI
CLIMACYTGGFLNSSIHTGDTFRLSFCGSNAVHHFFCDVPAVMTLSCSDRHVSEIVLIYGAGFIICSALL
VILISYTFIFITIFRMRSAAGYQKAMSTCVSHFTAVSIFYGTVIFMYLQPTSSHSMDTDKTVSVFYTMVI
PMLNPMVYSLRNKEVKSAFKKVVEKAKYSLGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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