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Report for CCDS2908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2908.1 Public Homo sapiens 3 EOGT 24 110 108 CCDS HistoryNCBI Gene:285203Re-query CCDS DB by CCDS ID:2908.1Re-query CCDS DB by GeneID:285203See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2908.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295571.9 ENSP00000295571.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295571.9Link to Ensembl Protein Viewer:ENSP00000295571.5Re-query CCDS DB by Nucleotide ID:ENST00000295571Re-query CCDS DB by Protein ID:ENSP00000295571
Original member Current member EBI ENST00000540955.5 ENSP00000444264.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540955.5Link to Ensembl Protein Viewer:ENSP00000444264.2Re-query CCDS DB by Nucleotide ID:ENST00000540955Re-query CCDS DB by Protein ID:ENSP00000444264
Original member Current member NCBI NM_173654.3 NP_775925.1 Accepted alive Link to Nucleotide Sequence:NM_173654.3Link to Protein Sequence:NP_775925.1Re-query CCDS DB by Nucleotide ID:NM_173654Re-query CCDS DB by Protein ID:NP_775925Link to BLAST:NP_775925.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775925.1 443 Q5NDL2-3 443 100% 0 0

Chromosomal Locations for CCDS 2908.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 68977618 68977764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68978333 68978435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68979668 68979787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68982811 68982872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68987445 68987513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68998011 68998114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69001608 69001714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69004378 69004482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69005140 69005234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69007713 69007821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69008428 69008528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69009637 69009846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1332 nt):
ATGTTAATGTTGTTTGTCTTTGGAGTCTTACTTCATGAAGTCTCACTGAGTGGTCAGAATGAAGCTCCTC
CTAATACTCACAGCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACAT
TCCCTTCTTTTTGCACAACAATAGGCATATTGCCACTGTCTGTAGGAAAGACTCTCTTTGTCCATATAAG
AAACACCTAGAGAAGCTAAAGTACTGCTGGGGTTATGAGAAATCCTGCAAACCAGAGTTCAGGTTTGGTT
ACCCAGTTTGCAGCTATGTCGACATGGGATGGACGGACACTCTTGAGTCAGCTGAGGACATATTTTGGAA
ACAAGCTGACTTTGGATATGCCAGAGAGAGGCTGGAGGAGATGCATGTGCTCTGTCAGCCTAAGGAAACG
AGTGACTCAAGTCTGGTGTGTTCCCGTTATCTTCAGTACTGCAGAGCAACCAATCTCTATCTTGATTTAA
GAAACATCAAGAGAAATCATGACAGATTTAAGGAGGACTTTTTCCAGAGTGGTGAAATTGGAGGGCACTG
TAAACTTGACATCCGTACATTGACGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCATGGTTTGCTGAG
CTACAAAGCTATACTCAGCTCAACTTCAGACCTATAGAAGATGCTAAATGTGACATTGTCATTGAAAAAC
CAACATATTTCATGAAATTAGATGCAGGTGTTAACATGTATCACCACTTCTGTGATTTCATCAATCTTTA
TATTACTCAGCACGTTAATAACTCATTCAGTACTGACGTGTACATCGTGATGTGGGACACCGATGGAAAA
ATTCGAGTCACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTTGTAAATG
CACTGAAAACAGTATCTACATTTGAAGTCCAGATTGTTGATTACAAGTATAGAGAACTTGGGTTTTTAGA
TCAACTAAGGATCACACACAACACGGACATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTT
TTCCTTCCAGACTGGGCTGCTGTATTTGAACTGTACAACTGTGAAGATGAACGCTGTTACTTAGACTTGG
CCAGGCTGAGAGGCGTTCACTACATCACTTGGCGACGGCAGAACAAAGTCTTTCCTCAGGATAAGGGCCA
CCATCCAACCCTGGGGGAGCACCCGAAGTTCACCAACTACTCTTTCGATGTAGAAGAATTTATGTATCTT
GTCCTTCAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACATGATGAGCTAT
AA

Translation (443 aa):
MLMLFVFGVLLHEVSLSGQNEAPPNTHSIPGEPLYNYASIRLPEEHIPFFLHNNRHIATVCRKDSLCPYK
KHLEKLKYCWGYEKSCKPEFRFGYPVCSYVDMGWTDTLESAEDIFWKQADFGYARERLEEMHVLCQPKET
SDSSLVCSRYLQYCRATNLYLDLRNIKRNHDRFKEDFFQSGEIGGHCKLDIRTLTSEGQRKSPLQSWFAE
LQSYTQLNFRPIEDAKCDIVIEKPTYFMKLDAGVNMYHHFCDFINLYITQHVNNSFSTDVYIVMWDTDGK
IRVTILARSTEYRKILNQNELVNALKTVSTFEVQIVDYKYRELGFLDQLRITHNTDIFIGMHGAGLTHLL
FLPDWAAVFELYNCEDERCYLDLARLRGVHYITWRRQNKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYL
VLQAADHVLQHPKWPFKKKHDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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