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Report for CCDS27865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27865.1 Public Mus musculus 15 Krt77 23 108 98 CCDS HistoryNCBI Gene:406220Re-query CCDS DB by CCDS ID:27865.1Re-query CCDS DB by GeneID:406220See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27865.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087996.6 ENSMUSP00000085311.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087996.6Link to Ensembl Protein Viewer:ENSMUSP00000085311.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000087996Re-query CCDS DB by Protein ID:ENSMUSP00000085311
Original member Current member NCBI NM_001003667.2 NP_001003667.1 Accepted alive Link to Nucleotide Sequence:NM_001003667.2Link to Protein Sequence:NP_001003667.1Re-query CCDS DB by Nucleotide ID:NM_001003667Re-query CCDS DB by Protein ID:NP_001003667Link to BLAST:NP_001003667.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003667.1 572 Q6IFZ6 572 100% 0 0

Chromosomal Locations for CCDS 27865.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101859856 101860103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101860527 101860561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101860889 101861109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101861219 101861344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101862778 101862942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101863752 101863847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101864315 101864375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101865451 101865665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101869067 101869618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGAGCCGCCAGTTTAGTTCTCAGTCTGCATTTAGCTCGAGGAGCAGGAGGGCCTATAGCTCCAGGTCTT
CATCAGGCTTTGGAGGTGGGAGACAGGCTCTGGTGTCTGTGAGTCAGTCGAGGAGGTATGGCGGTGATTA
TGGTGGTGGGTTCAGTTCCAGGAGTCTCTACAGTCTGGGTGGTAGTAAAAGCATCTTTGGGAACCTAGTG
GGACGAAGTGCCAGTGGTTTCTGCCAGAGTAGAGGGCCAGGAGGAGGATTTGGAGGAGGAATCGGAGGAG
GAATTGGAGGAGGAAGAGGCTTTGGTGGAGGTGGCTTTGGTGGTGGCTATGGCGGAGGTGGCAGATTTGG
AGGTGGTTTTGGGGGTGCTGGATTTGGATTTGGGGGCTTCGGTCCTTCTTATCCTCCCGGGGGCATCCAT
GAGGTGACTATTAACCAGAGTCTCCTGGAGCCCCTTCACCTGGAGGTGGATCCTGAAATTCAGAGGGTCA
AGACCCAGGAGCGGGAACAGATCAAGACCCTCAACAACAAGTTTGCCTCCTTCATTGACAAGGTGCGGTT
CCTGGAGCAGCAGAACCAGGTGCTACAGACAAAATGGGAGCTGCTGCAGCAGGTGAACACCTCCACCCGG
ACCAGCAGCCTGGAGCCAGTCTTCGAGGAGTTCATCAGTCAGCTGCAGAGGCAGGTGGATGTTCTGACCA
CCGAGCAGTTGCGCCAGAACACGGAGATCAGGAACATGCAGGATGTCGTGGAGGACTACAAGAACAAGTA
TGAGGATGAAATCAACAAGCGGACCAATGCAGAAAATGACTTTGTTGTTCTGAAGAAGGACGTGGATGCT
GCTTTCATGGGCAAATCAGACTTGCAGTCCAAAGTAGACACACTGTATGGGGAGATCAACTTCCTGAAAT
ATCTATTTGATACGGAGCTGTCCCAGATACAAACCCACGTCAGTGATACCAATGTCATCTTGTCAATGGA
CAATAACCGCTCCCTGGACCTGGACAGCATCATCGATGCCGTACGAGCCCAGTATGAAATAATTGCACAG
AAGAGCAAAGATGAGGCTGAGGCCCTGTACCAGACCAAGTACCAGGAGCTGCAGATTACAGCTGGGAAAC
ACGGAGACGACCTGAAGAATAGCAAGATGGAGATCTCAGAGCTCAACCGTAACATCCAGAGGCTGCGGGC
AGAGATCGCCAATATCAAGAAGCAGGTCGAAGGGATGCACGGATTGATTTCTGATGCGGAGGAGAGAGGA
GAAAGGGCTCTCCAGAACGCCAAGCAGAAGCTGCAAGACATGGAAGAGGCCCTCCAGCAGGCTAAGGAGG
ATCTGGCCAAGCTGCTGAGAGACTACCAGGCAATGCTGGGTGCCAAGCTGTCCTTGGACGTAGAGATCGC
CACCTACCGCCAGCTTTTGGAGGGCGAGGAGAGCAGGATGTCGGGGGCGCTGCAGAGTCAAGTGAGCATC
TCGGTGCAGAGTAGCCAGGTGACCATTGGCGGCGGTGGCGGCGGCTCAGGAAGTTACAGCGGCAGCTCCC
GCGGAGGCGGTGGTGGCGGCGGAGGAACTGGCTCCCGCGGCGGCGGCGGCGGCGGCGGCGGCAGTAGTTA
CGTCTCCAGCAGCAGAAGCGCCACTAAATATGGCAGCGGCGGCGGCTCCTCCCGCACTCAGATCCTGCAG
ACCTCCACCCACAGCTCGCGTAGGCACGTGGTGGAGTAG

Translation (572 aa):
MSRQFSSQSAFSSRSRRAYSSRSSSGFGGGRQALVSVSQSRRYGGDYGGGFSSRSLYSLGGSKSIFGNLV
GRSASGFCQSRGPGGGFGGGIGGGIGGGRGFGGGGFGGGYGGGGRFGGGFGGAGFGFGGFGPSYPPGGIH
EVTINQSLLEPLHLEVDPEIQRVKTQEREQIKTLNNKFASFIDKVRFLEQQNQVLQTKWELLQQVNTSTR
TSSLEPVFEEFISQLQRQVDVLTTEQLRQNTEIRNMQDVVEDYKNKYEDEINKRTNAENDFVVLKKDVDA
AFMGKSDLQSKVDTLYGEINFLKYLFDTELSQIQTHVSDTNVILSMDNNRSLDLDSIIDAVRAQYEIIAQ
KSKDEAEALYQTKYQELQITAGKHGDDLKNSKMEISELNRNIQRLRAEIANIKKQVEGMHGLISDAEERG
ERALQNAKQKLQDMEEALQQAKEDLAKLLRDYQAMLGAKLSLDVEIATYRQLLEGEESRMSGALQSQVSI
SVQSSQVTIGGGGGGSGSYSGSSRGGGGGGGGTGSRGGGGGGGGSSYVSSSRSATKYGSGGGSSRTQILQ
TSTHSSRRHVVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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