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Report for CCDS27841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27841.1 Public Mus musculus 15 Dazap2 23 108 98 CCDS HistoryNCBI Gene:23994Re-query CCDS DB by CCDS ID:27841.1Re-query CCDS DB by GeneID:23994See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27841.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000000356.9 ENSMUSP00000000356.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000000356.9Link to Ensembl Protein Viewer:ENSMUSP00000000356.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000000356Re-query CCDS DB by Protein ID:ENSMUSP00000000356
Original member Current member NCBI NM_011873.2 NP_036003.2 Accepted alive Link to Nucleotide Sequence:NM_011873.2Link to Protein Sequence:NP_036003.2Re-query CCDS DB by Nucleotide ID:NM_011873Re-query CCDS DB by Protein ID:NP_036003Link to BLAST:NP_036003.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036003.2 168 Q9DCP9 168 100% 0 0

Chromosomal Locations for CCDS 27841.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 100615712 100615724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100616913 100617031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100617925 100618170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100619368 100619496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGAACAGCAAAGGTCAATATCCAACACAGCCTACCTACCCTGTGCAACCTCCTGGGAATCCAGTATATC
CTCAGACCTTACATCTTCCTCAGGCTCCACCCTATACTGATGCTCCACCTGCATATTCAGAGCTCTATCG
TCCAAGCTTTGTTCATCCAGGGGCTGCCACAGTCCCCACCATGTCAGCTGCATTTCCTGGCGCCTCATTG
TATCTGCCTATGGCCCAGTCTGTGGCTGTTGGGCCTCTAGGCTCCACAATCCCCATGGCTTATTATCCAG
TTGGTCCCATCTATCCACCTGGCTCAGCAGTGTTGGTGGAAGGAGGGTATGATGCAGGTGCCAGATTTGG
AGCTGGTGCCACTGCTGGCAACATTCCTCCTCCACCTCCTGGATGCCCTCCCAACGCTGCTCAGCTCGCA
GTCATGCAGGGAGCCAACGTCCTTGTAACTCAGCGCAAGGGAAACTTCTTCATGGGTGGCTCAGATGGTG
GCTACACCATTTGGTGA

Translation (168 aa):
MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFPGASL
YLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLA
VMQGANVLVTQRKGNFFMGGSDGGYTIW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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