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Report for CCDS27631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27631.1 Public Mus musculus 15 Galr3 23 108 98 CCDS HistoryNCBI Gene:14429Re-query CCDS DB by CCDS ID:27631.1Re-query CCDS DB by GeneID:14429See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058004.3 ENSMUSP00000060517.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058004.3Link to Ensembl Protein Viewer:ENSMUSP00000060517.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000058004Re-query CCDS DB by Protein ID:ENSMUSP00000060517
Original member Current member NCBI NM_015738.2 NP_056553.2 Accepted alive Link to Nucleotide Sequence:NM_015738.2Link to Protein Sequence:NP_056553.2Re-query CCDS DB by Nucleotide ID:NM_015738Re-query CCDS DB by Protein ID:NP_056553Link to BLAST:NP_056553.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056553.2 370 O88853 370 100% 0 0

Chromosomal Locations for CCDS 27631.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79041932 79042290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79042720 79043473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGGCTGACATCCAGAACATTTCGCTGGACAGCCCAGGGAGCGTAGGGGCTGTGGCAGTGCCGGTGGTCT
TTGCCCTCATCTTCCTGTTGGGCATGGTGGGTAATGGGCTGGTGTTGGCCGTGCTTCTGCAGCCTGGCCC
AAGTGCCTGGCAGGAACCGGGCAGTACCACGGATCTCTTCATCCTCAACTTGGCGGTGGCCGACCTTTGC
TTCATCCTGTGCTGCGTGCCCTTCCAGGCGGCCATCTACACACTGGATGCCTGGCTCTTTGGGGCTTTCG
TGTGCAAGACGGTACATCTGCTCATCTACCTCACCATGTATGCCAGCAGCTTCACCCTGGCGGCCGTCTC
AGTGGATAGGTACCTGGCGGTGCGACACCCGCTGCGCTCCCGGGCCCTCCGCACCCCGCGCAACGCGCGC
GCCGCCGTGGGGCTCGTGTGGCTGCTGGCGGCGCTCTTTTCCGCGCCCTACCTAAGCTACTACGGCACGG
TGCGCTACGGCGCGCTCGAGCTCTGCGTGCCCGCCTGGGAGGACGCGCGGCGGCGCGCGCTGGACGTGGC
CACCTTCGCCGCAGGCTACCTGCTGCCGGTGACCGTGGTGAGCCTGGCCTACGGACGCACGCTGTGCTTC
CTGTGGGCCGCCGTGGGTCCCGCGGGTGCGGCGGCGGCAGAGGCACGCAGACGGGCAACCGGCCGCGCGG
GGCGCGCCATGCTGACGGTGGCCGCGCTCTACGCACTCTGCTGGGGCCCGCACCACGCGCTCATCCTCTG
CTTCTGGTACGGCCGCTTCGCCTTCAGCCCGGCCACCTACGCCTGTCGTCTGGCTTCGCACTGCCTCGCC
TACGCCAACTCCTGCCTCAACCCGCTCGTCTATTCCCTTGCCTCCCGCCACTTCCGCGCGCGCTTCCGCC
GCCTGTGGCCCTGCGGCCACCGCCGCCACCGCCACCACCACCACCGCCTTCATCGAGCCCTCCGTCGTGT
CCAGCCGGCGTCTTCGGGCCCCGCCGGCTATCCCGGCGACGCCAGACCTCGCGGTTGGAGTATGGAGCCC
AGAGGGGATGCCTTGCGCGGTGGAGAGACTAGACTAACCCTGTCCGCCAGGGGACCGCAATAA

Translation (370 aa):
MADIQNISLDSPGSVGAVAVPVVFALIFLLGMVGNGLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLC
FILCCVPFQAAIYTLDAWLFGAFVCKTVHLLIYLTMYASSFTLAAVSVDRYLAVRHPLRSRALRTPRNAR
AAVGLVWLLAALFSAPYLSYYGTVRYGALELCVPAWEDARRRALDVATFAAGYLLPVTVVSLAYGRTLCF
LWAAVGPAGAAAAEARRRATGRAGRAMLTVAALYALCWGPHHALILCFWYGRFAFSPATYACRLASHCLA
YANSCLNPLVYSLASRHFRARFRRLWPCGHRRHRHHHHRLHRALRRVQPASSGPAGYPGDARPRGWSMEP
RGDALRGGETRLTLSARGPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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