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Report for CCDS27518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27518.1 Public Mus musculus 15 Gpr20 23 108 98 CCDS HistoryNCBI Gene:239530Re-query CCDS DB by CCDS ID:27518.1Re-query CCDS DB by GeneID:239530See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27518.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064166.4 ENSMUSP00000063910.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064166.4Link to Ensembl Protein Viewer:ENSMUSP00000063910.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000064166Re-query CCDS DB by Protein ID:ENSMUSP00000063910
Original member Current member NCBI NM_173365.2 NP_775541.1 Accepted alive Link to Nucleotide Sequence:NM_173365.2Link to Protein Sequence:NP_775541.1Re-query CCDS DB by Nucleotide ID:NM_173365Re-query CCDS DB by Protein ID:NP_775541Link to BLAST:NP_775541.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775541.1 358 Q8BYC4 358 100% 0 0

Chromosomal Locations for CCDS 27518.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 73695462 73696538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGCCCTCTGCGTTGTCTATGAGGCCCTGGGATGCTGCACTCCCCAACACCACTGCAGCAGCATGGACCA
ATGGAAGTGTGCCGGAGATGCCCCTGTTCCATCACTTTGCCCGGCTGGATGAGGAACTGCAAGCCACCTT
CCCCAGCCTGTGGCAAGCACTAATGGTCGTGCACGGCACCATCTTCCTTGCCGGGCTGGTGCTCAACGGA
CTGGCACTGTATGTCTTCTGCTGTCGCACGCGGGCCAAGACCCCTTCAGTCACCTATACCATCAACCTGG
TGGTGACTGACCTGCTAGTGGGCCTGTCCCTGCCCACACGCTTTGCTGTCTTCTACGGTGCCCGAGGCTG
TCTGCGCTGTGCCTTCCCTCATGTCCTGGGCTACTTCCTCAACATGCACTGTTCCATCCTCTTCCTCACC
TGCATCTGCGTGGACCGCTACCTGGCCATTGTGCAACCCGAGGGTTCCCGCCGCTGGCGCCAGCCGGCCT
GCGCCAAGGCCGTGTGCATCTTTGTGTGGCTGGCAGCAGGAGTCGTGACCCTGTCTGTGCTGGGTGTGAA
GTCGGGTGGACGATCATGCTGCCGTGTCTTTGCTCTGACCGTTCTGGAGTTCCTGCTGCCTCTGCTGGTC
ATCAGCGTGTTCACAGGCCGGATCATGTGTGCGCTGTCGAGGCCGGGTCTGCTACGCCAGGGCCGTCAGC
GGCGCGTGAGGGCCATGCAGCTGCTGCTCACGGTGCTGGTCATCTTCCTGGTCTGTTTCACACCCTTCCA
TGCCCGCCAGGTGGCTGTGGCACTGTGGCCTAACGTACCTAAGCATACCAGCCTTGTGGCTTACCACGTG
GCTGTCACCCTCAGCAGCCTCAACAGCTGCATGGACCCCATTGTCTACTGTTTCATCACCAGTGGCTTCC
AGGCCACTGTCCGAGGCCTCTTCTACCAGCGTGGAGAAGAATTCAAGCCCAGCAGTATGGATGTGGTCAG
CATGCACAAGAGCACCAAGGCCTCAGCTCCCATTCACATCCTCAGCATCGGTTCCCACACCCTTACCCAG
CCTTTGACCAACGGGCCTGAGCCGTAG

Translation (358 aa):
MPSALSMRPWDAALPNTTAAAWTNGSVPEMPLFHHFARLDEELQATFPSLWQALMVVHGTIFLAGLVLNG
LALYVFCCRTRAKTPSVTYTINLVVTDLLVGLSLPTRFAVFYGARGCLRCAFPHVLGYFLNMHCSILFLT
CICVDRYLAIVQPEGSRRWRQPACAKAVCIFVWLAAGVVTLSVLGVKSGGRSCCRVFALTVLEFLLPLLV
ISVFTGRIMCALSRPGLLRQGRQRRVRAMQLLLTVLVIFLVCFTPFHARQVAVALWPNVPKHTSLVAYHV
AVTLSSLNSCMDPIVYCFITSGFQATVRGLFYQRGEEFKPSSMDVVSMHKSTKASAPIHILSIGSHTLTQ
PLTNGPEP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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