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Report for CCDS27495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27495.1 Public Mus musculus 15 Ndufb9 23 108 98 CCDS HistoryNCBI Gene:66218Re-query CCDS DB by CCDS ID:27495.1Re-query CCDS DB by GeneID:66218See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27495.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022980.4 ENSMUSP00000022980.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022980.4Link to Ensembl Protein Viewer:ENSMUSP00000022980.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000022980Re-query CCDS DB by Protein ID:ENSMUSP00000022980
Original member Current member NCBI NM_023172.4 NP_075661.1 Accepted alive Link to Nucleotide Sequence:NM_023172.4Link to Protein Sequence:NP_075661.1Re-query CCDS DB by Nucleotide ID:NM_023172Re-query CCDS DB by Protein ID:NP_075661Link to BLAST:NP_075661.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075661.1 179 Q9CQJ8 179 100% 0 0

Chromosomal Locations for CCDS 27495.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 58933838 58933938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58936268 58936460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58937352 58937465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58939275 58939406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGGCGTTCTGCGCTCCCCCGGCCTACCTGACCCACCAGCAGAAGGTGCTGCGGCTGTATAAGCGCGCGC
TGCGCCACCTCGAGTCATGGTGTATCCACAGGGACAAGTACCGGTACTTTGCTTGCTTGATGAGAGCCCG
GTTTGAAGAACATAAGAATGAGAAGGATATGATGAGGGCTACCCAGCTGCTGAGGGAGGCAGAAGAAGAA
TTCTGGCAGAATCAGCATCCTCAGCCGTATATCTTCCCAGACTCTCCGGGGGGCACTTCCTTCGAGAGAT
ATGAGTGCTACAAGGTTCCAGAATGGTGCTTAGATTACTGGCATCCCTCTGAGAAAGCAATGTATCCTGA
TTACTTTTCCAAGAGAGAGCAGTGGAAGAAGCTGAGGATGGAGAGCTGGGATCGGGAGGTTAAGCAGCTG
CAGGAGGAAACATCACCTGATGGTATTATGACTGAAGCTTTGCCTCCTGCCAGAAGGGAAGGTGACTTGC
CCCCACTGTGGTGGCATATTGTGACCAGACCTCGGGAACGGCCCACATAG

Translation (179 aa):
MAFCAPPAYLTHQQKVLRLYKRALRHLESWCIHRDKYRYFACLMRARFEEHKNEKDMMRATQLLREAEEE
FWQNQHPQPYIFPDSPGGTSFERYECYKVPEWCLDYWHPSEKAMYPDYFSKREQWKKLRMESWDREVKQL
QEETSPDGIMTEALPPARREGDLPPLWWHIVTRPRERPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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