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Report for CCDS27375.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27375.1 Public Mus musculus 15 Ugt3a2 23 108 98 CCDS HistoryNCBI Gene:223337Re-query CCDS DB by CCDS ID:27375.1Re-query CCDS DB by GeneID:223337See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27375.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072403.6 ENSMUSP00000072236.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072403.6Link to Ensembl Protein Viewer:ENSMUSP00000072236.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000072403Re-query CCDS DB by Protein ID:ENSMUSP00000072236
Original member NCBI NM_144845.3 NP_659094.1 Updated not alive Link to Nucleotide Sequence:NM_144845.3Link to Protein Sequence:NP_659094.1Re-query CCDS DB by Nucleotide ID:NM_144845Re-query CCDS DB by Protein ID:NP_659094
Current member NCBI NM_144845.4 NP_659094.1 Accepted alive Link to Nucleotide Sequence:NM_144845.4Link to Protein Sequence:NP_659094.1Re-query CCDS DB by Nucleotide ID:NM_144845Re-query CCDS DB by Protein ID:NP_659094Link to BLAST:NP_659094.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659094.1 523 Q8JZZ0 523 100% 0 0

Chromosomal Locations for CCDS 27375.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 9335695 9335788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9338646 9338744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9351100 9351214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9361448 9361982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9365146 9365377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9367248 9367467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 9370067 9370343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGCAGCACATCGGCGTTGGCTTCTCATGAGCTTCCTTTTCCTTGAGGTTATTCTCTTGGAGGCTGCAA
AAATCCTGACTATATCTACACTGAGTGCAAGCCATTATATAGTGATAAGCCGTGTGTCGCAAGTTCTTCA
TGAAGGTGGCCACAATGTGACCAAACTTCTTTATGAAAGTGCTAATATCCCAGATTTTAGAAAGGAAAAA
CCATCATATCAAGTTATTAATTGGCGTCCACCTGAAGATCAGGAAAAGAAATTTGCTGATCTTAGGCATC
GACTTACAGAAGAAATAACTTATGGCAGGTCCAAACATCACACCCTTCTAAAGATCCATCAATACTTTGG
GGACTTATGCAGTCAATTATTAAGCAGAAAGGACATCATGGACTTCTTAAAAAATGAGAACTTTGACCTA
GTACTTCTTGATTCAATGGATCTCTGTTCTTTGCTAATTGTTGAAAAGCTTGGGAAACGATTTGTGTCCT
TTCTTCCCTTTCAATTTAGCTATATGGACTTTGGGTTACCAAGCGCCCCCTTGTCCTATGCTCCAGTGTA
TGGTTCTGGTCTAACTGACCAAATGGACTTCTGGGGCCGAGTGAAGAACTTTCTGATGTTCCTTGATTTC
TCCATGAAGCAAAGGGAAATCCTTTCTCAGTATGACAGCACTATCCAGGAGCATTTTGTGGAAGGCTCTC
AGCCAGTGTTGTCTGACCTTCTACTGAAAGCTGAGCTGTGGTTTGTCAACTCTGACTTTGCTTTGGATTT
TGCTCGTCCCCTGTTTCCCAACACAGTCTATGTGGGAGGTTTACTGGACAAACCTGTTCAGCCAATACCC
CAAGACTTGGAGAATTTTATCTCTCAGTTTGGAGACTCAGGTTTTGTCCTTGTGGCCCTGGGCTCTATAG
TGAGCATGATTCAGTCCAAGGAAATTATTAAGGAGATGAACAGTGCCTTTGCTCACCTCCCTCAAGGGGT
GCTATGGACATGTAAGACTTCTCATTGGCCCAAAGATGTCAGTTTGGCCCCAAATGTCAAAATCATGGAT
TGGCTTCCACAGACTGACCTTCTAGCTCACCCTAGCATTCGTCTGTTTGTCACTCATGGAGGGATGAACA
GTGTGATGGAGGCTGTCCATCATGGAGTACCCATGGTGGGGATTCCATTTTTTTTTGACCAACCTGAAAA
CATGGTCCGAGTAGAAGCAAAGAACCTTGGTGTTTCTATTCAGCTACAGACGCTCAAGGCAGAGTCATTT
GCGCTCACCATGAAAAAAATCATAGAAGACAAGAGGTACAAGTCTGCAGCAATGGCCTCCAAGATTATCA
GGCACTCCCACCCACTGACCCCTGCCCAGAGGCTTTTGGGCTGGATAGATCATATCTTGCAGACAGGGGG
TGCAGCACATCTCAAGCCATATGCTTTCCAGCAGCCATGGCATGAGCAGTACATGCTTGATGTCTTCCTC
TTTCTCCTAGGGCTCATGCTGGGTACTTTGTGGCTTAGTGTAAAGGTTCTTGTTGCTGTAACCAGGTATC
TGAGTATAGCAACGAAGGTCAAGGAGGCATAA

Translation (523 aa):
MAAHRRWLLMSFLFLEVILLEAAKILTISTLSASHYIVISRVSQVLHEGGHNVTKLLYESANIPDFRKEK
PSYQVINWRPPEDQEKKFADLRHRLTEEITYGRSKHHTLLKIHQYFGDLCSQLLSRKDIMDFLKNENFDL
VLLDSMDLCSLLIVEKLGKRFVSFLPFQFSYMDFGLPSAPLSYAPVYGSGLTDQMDFWGRVKNFLMFLDF
SMKQREILSQYDSTIQEHFVEGSQPVLSDLLLKAELWFVNSDFALDFARPLFPNTVYVGGLLDKPVQPIP
QDLENFISQFGDSGFVLVALGSIVSMIQSKEIIKEMNSAFAHLPQGVLWTCKTSHWPKDVSLAPNVKIMD
WLPQTDLLAHPSIRLFVTHGGMNSVMEAVHHGVPMVGIPFFFDQPENMVRVEAKNLGVSIQLQTLKAESF
ALTMKKIIEDKRYKSAAMASKIIRHSHPLTPAQRLLGWIDHILQTGGAAHLKPYAFQQPWHEQYMLDVFL
FLLGLMLGTLWLSVKVLVAVTRYLSIATKVKEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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