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Report for CCDS27187.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27187.1 Public Mus musculus 14 Kcnrg 23 108 98 CCDS HistoryNCBI Gene:328424Re-query CCDS DB by CCDS ID:27187.1Re-query CCDS DB by GeneID:328424See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27187.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051184.9 ENSMUSP00000055327.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051184.9Link to Ensembl Protein Viewer:ENSMUSP00000055327.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000051184Re-query CCDS DB by Protein ID:ENSMUSP00000055327
Original member NCBI NM_001039105.3 NP_001034194.1 Updated not alive Link to Nucleotide Sequence:NM_001039105.3Link to Protein Sequence:NP_001034194.1Re-query CCDS DB by Nucleotide ID:NM_001039105Re-query CCDS DB by Protein ID:NP_001034194
Current member NCBI NM_001039105.4 NP_001034194.1 Accepted alive Link to Nucleotide Sequence:NM_001039105.4Link to Protein Sequence:NP_001034194.1Re-query CCDS DB by Nucleotide ID:NM_001039105Re-query CCDS DB by Protein ID:NP_001034194Link to BLAST:NP_001034194.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034194.1 264 Q2TUM3-1 264 100% 0 0

Chromosomal Locations for CCDS 27187.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 61607513 61608072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61611652 61611886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGAGTGGTCAGGACCTCGTCACTTTGAATGTGGGAGGGAGGATATTCACAACAAGGCCCTCTACCCTCA
AGCAGTTCCCTGCCTCTCGCTTGGCAGGCATGTTAGATGGCAGAGACCAAGAGTTCAAGACAGTTGATGG
CCAGATTTTTGTGGACAGAGATGGTGCTTTATTTAGTTTCATTTTAGATTTTTTGAGAAATCATGAGCTT
CTGTTACCCTCGGACTTTGCAGACCATCATAGGCTTCAGAGAGAGGCTCTTTTCTATGAACTTGATTCTC
TTGTTGATCTCTTAAGCCAATTCCTGCTCCAATCAAGATCTGCTGTCATGGAGGTCCATTTCCTAAACCA
AAATACTCAAGCCTTCTTCAGAGTGTTTGGCTCTTGCAGCAAAACAATCGAGATGCTAAGTGGGAGGATT
ACAATGTTTGTAGAGCGACCCACAGCACTGACCGGGAACAGGAACTCCCCTCTGGCTTTACCTCCACAAA
GACCTTCTCACCACGATCTGCTTTTCCACTGTGGCTCCGATGGCGCTGCTGAGAACCAAGCTGGAGTCAG
GTACATTTCCATAAAGCCTGATAATCGAAAATTGGCCAACGGAACAAATGTCTTGGGCCTACTGGTGGAC
ACTTTATTAAAGGAAGGCTTTCATCTGGTCAGCACTAGAACACCAGCCTCTGGAGAAAAAAGTGAATGCT
ATGTCTTTGAAAGGATAACAACCCCTCAAGTCCTTGGGATGAGTAAAACACCCAAATCAGAAACTACCAC
CATGCCAGCGCCGTCTCAGAAGTGA

Translation (264 aa):
MSGQDLVTLNVGGRIFTTRPSTLKQFPASRLAGMLDGRDQEFKTVDGQIFVDRDGALFSFILDFLRNHEL
LLPSDFADHHRLQREALFYELDSLVDLLSQFLLQSRSAVMEVHFLNQNTQAFFRVFGSCSKTIEMLSGRI
TMFVERPTALTGNRNSPLALPPQRPSHHDLLFHCGSDGAAENQAGVRYISIKPDNRKLANGTNVLGLLVD
TLLKEGFHLVSTRTPASGEKSECYVFERITTPQVLGMSKTPKSETTTMPAPSQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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