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Report for CCDS26783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26783.1 Public Mus musculus 13 Gzmk 23 108 98 CCDS HistoryNCBI Gene:14945Re-query CCDS DB by CCDS ID:26783.1Re-query CCDS DB by GeneID:14945See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26783.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038212.13 ENSMUSP00000044512.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038212.13Link to Ensembl Protein Viewer:ENSMUSP00000044512.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000038212Re-query CCDS DB by Protein ID:ENSMUSP00000044512
Original member Current member NCBI NM_008196.2 NP_032222.1 Accepted alive Link to Nucleotide Sequence:NM_008196.2Link to Protein Sequence:NP_032222.1Re-query CCDS DB by Nucleotide ID:NM_008196Re-query CCDS DB by Protein ID:NP_032222Link to BLAST:NP_032222.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032222.1 263 O35205 263 100% 0 0

Chromosomal Locations for CCDS 26783.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 113171874 113172035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113172885 113173154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113173923 113174073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113180435 113180582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 113180837 113180897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGAGGTTTTCTTCATGGGCTCTGGTTTCCCTGGTGGCTGGCGTTTATATGTCTTCAGAGTGTTTCCATA
CTGAAATTATTGGAGGGAGGGAAGTCCAGCCGCATTCCAGGCCATTTATGGCGTCCATCCAGTACCGCAG
CAAGCATATTTGTGGAGGAGTCCTGATCCACCCACAGTGGGTGCTAACAGCCGCCCACTGCTACTCTTGG
TTTCCCAGAGGCCACTCTCCCACCGTGGTTTTAGGAGCACATTCTCTTTCCAAGAATGAGCCCATGAAGC
AGACATTTGAAATTAAAAAGTTCATCCCATTCTCACGACTTCAGTCCGGTTCCGCATCGCATGACATCAT
GCTGATAAAGCTTCGCACTGCTGCAGAACTAAACAAGAATGTCCAACTGCTTCACCTGGGATCCAAAAAC
TATCTTAGAGATGGGACCAAATGCCAGGTGACTGGCTGGGGAACCACCAAGCCAGATCTGTTAACCGCCT
CTGATACCCTGAGAGAAGTCACTGTTACCATCATAAGTAGAAAACGCTGTAACAGCCAAAGCTACTACAA
CCACAAACCTGTTATAACCAAGGACATGATATGTGCAGGAGATGCCAGAGGTCAAAAGGATTCCTGCAAG
GGTGACTCTGGTGGCCCTTTGATCTGCAAAGGCATCTTCCATGCCCTAGTCTCTCAGGGCTATAAATGTG
GCATCGCCAAAAAGCCTGGAATCTATACGCTATTAACTAAGAAATACCAGACCTGGATCAAAAGCAAGCT
TGCCCCATCACGTGCACATTGA

Translation (263 aa):
MRFSSWALVSLVAGVYMSSECFHTEIIGGREVQPHSRPFMASIQYRSKHICGGVLIHPQWVLTAAHCYSW
FPRGHSPTVVLGAHSLSKNEPMKQTFEIKKFIPFSRLQSGSASHDIMLIKLRTAAELNKNVQLLHLGSKN
YLRDGTKCQVTGWGTTKPDLLTASDTLREVTVTIISRKRCNSQSYYNHKPVITKDMICAGDARGQKDSCK
GDSGGPLICKGIFHALVSQGYKCGIAKKPGIYTLLTKKYQTWIKSKLAPSRAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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