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Report for CCDS26598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26598.1 Public Mus musculus 13 Cdc14b 23 108 98 CCDS HistoryNCBI Gene:218294Re-query CCDS DB by CCDS ID:26598.1Re-query CCDS DB by GeneID:218294See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000039318.15 ENSMUSP00000046003.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000039318.15Link to Ensembl Protein Viewer:ENSMUSP00000046003.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000039318Re-query CCDS DB by Protein ID:ENSMUSP00000046003
Original member Current member EBI ENSMUST00000109770.1 ENSMUSP00000105392.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109770.1Link to Ensembl Protein Viewer:ENSMUSP00000105392.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109770Re-query CCDS DB by Protein ID:ENSMUSP00000105392
Original member Current member EBI ENSMUST00000221139.1 ENSMUSP00000152843.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000221139.1Link to Ensembl Protein Viewer:ENSMUSP00000152843.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000221139Re-query CCDS DB by Protein ID:ENSMUSP00000152843
Original member Current member NCBI NM_172587.3 NP_766175.3 Accepted alive Link to Nucleotide Sequence:NM_172587.3Link to Protein Sequence:NP_766175.3Re-query CCDS DB by Nucleotide ID:NM_172587Re-query CCDS DB by Protein ID:NP_766175Link to BLAST:NP_766175.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766175.3 485 Q6PFY9-1 485 100% 0 0

Chromosomal Locations for CCDS 26598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 64205303 64205417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64209107 64209204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64209926 64210085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64210195 64210333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64215500 64215730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64216212 64216299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64219886 64219948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64220680 64220746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64225572 64225648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64243634 64243726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64246525 64246600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64247228 64247318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 64274591 64274750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGAAGCGTAAGAGCGAGCGGCGCTCGGCTTGGGCCACCGCGCCCCCCTGCTCACGCCGCAGCTCGTCCT
CCTCTCCCGGCGTGAAGAAGAGCCGCAGCTCCACGCCGCAGGAGCTGCACCGCCTGGAGCAGCAGGACGA
CCTGTACCTGGACATCACGGATCGCCTTTGTTTTGCCATTCTCTACAGCAGACCAAAGAGTGCAACAAAC
GAACATTATTTCAGCATAGATAACGAGCTAGAGTATGAGAACTTCTATGCGGATTTTGGACCACTCAATC
TGGCCATGGTTTACAGATATTGTTGCAAGATAAATAAGAAGCTCAAGTCCATTACAATGCTGAGGAAGAA
AATTATCCATTTTACTGGCACTGATCAGAGAAAGCAAGCGAATGCCGCCTTCCTTGTCGGGTGTTATATG
GTTATATATTTGGGGAGGACACCAGAAGACGCGTATAGAACATTAATCTTCGGAGATACAGCCTATATTC
CTTTCAGAGATGCTGCCTATGGAAGCTGCAGTTTCTATATTACACTTCTCGACTGTTTTCACGCAGTAAA
GAAGGCAATGCAGTATGGCTTCTTTAATTTCAACTCATTTAACCTTGACGAATATGAACACTATGAAAAA
GCAGAAAATGGAGATTTCAACTGGATAATACCAGAGCGATTTCTTGCCTTCTGTGGGCCCCATTCAAGAT
CCAGGCTGGAAAGTGGTTACCACCAACATTCTCCGGAGACTTATATTCCATATTTTAAGAATCACAATGT
AACTACCATTATTCGTCTGAATAAAAGGATGTATGATGCTAAGCGCTTTACGGATGCTGGATTCGATCAC
CATGATCTTTTCTTTCCGGATGGCAGCACCCCTGCTGAGTCAATTGTCCAAGAATTTCTGGATATTTGTG
AAAATGTCAAGGGTGCCATTGCTGTGCATTGCAAAGCTGGCCTTGGTCGAACAGGCACTCTGATAGGCTG
CTACCTCATGAAGCATTACAGGATGACAGCAGCTGAGAGCATTGCCTGGCTCAGAATCTGTAGACCCGGC
TCAGTAATTGGGCCCCAGCAACAGTTTCTGGTCATGAAACAATCAAGCCTCTGGCTAGAAGGCGACTATT
TCCGTCAAAAGTTAAGAGGGCAGGAGAATGGCCCCCTCAGAGAAGCCTTCTCCAAACACCTTTCGGATGC
TGATGACCTGTCCTTAAATGGGCTTGAGAATCAAGACAATCAAGAGCCTGAGCCGTATAGTGATGATGAT
GAAGTCAGTGGAATGACACAAGGAGACAGACTTCGGGCCCTGAAAAGCCGGAGACAGCCGAAAGCCAGCG
CTATCCCCCTCACATGTCCCCTAGCTGTGCTGACCTCTGCACTGTGTAGTGTTGCCATCTGGTGGATTGT
GTGTGACTACATTCTTCCCACCCTGCTGTTCTGTCTTGATGGCTTCAGAACACAGTAG

Translation (485 aa):
MKRKSERRSAWATAPPCSRRSSSSSPGVKKSRSSTPQELHRLEQQDDLYLDITDRLCFAILYSRPKSATN
EHYFSIDNELEYENFYADFGPLNLAMVYRYCCKINKKLKSITMLRKKIIHFTGTDQRKQANAAFLVGCYM
VIYLGRTPEDAYRTLIFGDTAYIPFRDAAYGSCSFYITLLDCFHAVKKAMQYGFFNFNSFNLDEYEHYEK
AENGDFNWIIPERFLAFCGPHSRSRLESGYHQHSPETYIPYFKNHNVTTIIRLNKRMYDAKRFTDAGFDH
HDLFFPDGSTPAESIVQEFLDICENVKGAIAVHCKAGLGRTGTLIGCYLMKHYRMTAAESIAWLRICRPG
SVIGPQQQFLVMKQSSLWLEGDYFRQKLRGQENGPLREAFSKHLSDADDLSLNGLENQDNQEPEPYSDDD
EVSGMTQGDRLRALKSRRQPKASAIPLTCPLAVLTSALCSVAIWWIVCDYILPTLLFCLDGFRTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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