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Report for CCDS2657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2657.1 Public Homo sapiens 3 CRTAP 24 110 108 CCDS HistoryNCBI Gene:10491Re-query CCDS DB by CCDS ID:2657.1Re-query CCDS DB by GeneID:10491See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2657.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320954.11 ENSP00000323696.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320954.11Link to Ensembl Protein Viewer:ENSP00000323696.5Re-query CCDS DB by Nucleotide ID:ENST00000320954Re-query CCDS DB by Protein ID:ENSP00000323696
Original member Current member NCBI NM_006371.5 NP_006362.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006371.5Link to Protein Sequence:NP_006362.1Re-query CCDS DB by Nucleotide ID:NM_006371Re-query CCDS DB by Protein ID:NP_006362Link to BLAST:NP_006362.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006362.1 401 O75718 401 100% 0 0

Chromosomal Locations for CCDS 2657.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 33114078 33114548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 33120344 33120493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 33124408 33124579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 33129939 33130067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 33132555 33132700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 33134182 33134265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 33142395 33142448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGGAGCCGGGGCGCCGGGGGGCCGCGGCGCTGCTAGCGCTGCTGTGCGTGGCCTGCGCGCTGCGCGCCG
GGCGCGCCCAATACGAACGCTACAGCTTCCGCAGCTTCCCACGGGACGAGCTGATGCCGCTCGAGTCGGC
CTACCGGCACGCGCTGGACAAGTACAGCGGCGAGCACTGGGCCGAGAGCGTGGGCTACCTGGAGATCAGC
CTGCGGCTGCACCGCTTGCTGCGCGACAGCGAGGCCTTCTGCCACCGCAACTGCAGCGCCGCGCCGCAGC
CCGAGCCCGCCGCCGGCCTCGCCAGCTATCCCGAGCTGCGCCTCTTCGGGGGCCTGCTGCGCCGCGCGCA
CTGCCTCAAGCGCTGCAAGCAGGGCCTGCCAGCCTTCCGCCAGTCCCAGCCCAGCCGCGAGGTGCTGGCG
GACTTCCAGCGCCGCGAGCCCTACAAGTTCCTGCAGTTCGCTTACTTCAAGGCAAATAATCTCCCCAAAG
CCATCGCCGCTGCTCACACCTTTCTACTGAAGCATCCTGATGACGAAATGATGAAGAGGAACATGGCATA
TTATAAGAGCCTGCCTGGTGCCGAGGACTACATTAAAGACCTGGAAACCAAGTCATATGAAAGCCTGTTC
ATCCGAGCAGTGCGGGCATACAACGGTGAGAACTGGAGAACATCCATCACAGACATGGAGCTGGCCCTTC
CCGACTTCTTCAAAGCCTTTTACGAGTGTCTCGCAGCCTGCGAGGGTTCCAGGGAGATCAAGGACTTCAA
GGATTTCTACCTTTCCATAGCAGATCATTATGTAGAAGTTCTGGAATGCAAAATACAGTGTGAAGAGAAC
CTCACCCCAGTTATAGGAGGCTATCCGGTTGAGAAATTTGTGGCTACCATGTATCATTACTTGCAGTTTG
CCTATTATAAGTTGAACGACCTGAAGAATGCAGCCCCCTGTGCAGTCAGCTATCTGCTCTTTGATCAGAA
TGACAAGGTCATGCAGCAGAACCTGGTGTATTACCAGTACCACAGGGACACTTGGGGCCTCTCGGATGAG
CACTTCCAGCCCAGACCTGAAGCAGTTCAGTTCTTTAATGTGACCACACTCCAGAAGGAGCTGTATGACT
TTGCTAAGGAAAATATAATGGATGATGATGAGGGAGAAGTTGTGGAATATGTGGATGACCTCTTGGAACT
GGAGGAGACCAGCTAG

Translation (401 aa):
MEPGRRGAAALLALLCVACALRAGRAQYERYSFRSFPRDELMPLESAYRHALDKYSGEHWAESVGYLEIS
LRLHRLLRDSEAFCHRNCSAAPQPEPAAGLASYPELRLFGGLLRRAHCLKRCKQGLPAFRQSQPSREVLA
DFQRREPYKFLQFAYFKANNLPKAIAAAHTFLLKHPDDEMMKRNMAYYKSLPGAEDYIKDLETKSYESLF
IRAVRAYNGENWRTSITDMELALPDFFKAFYECLAACEGSREIKDFKDFYLSIADHYVEVLECKIQCEEN
LTPVIGGYPVEKFVATMYHYLQFAYYKLNDLKNAAPCAVSYLLFDQNDKVMQQNLVYYQYHRDTWGLSDE
HFQPRPEAVQFFNVTTLQKELYDFAKENIMDDDEGEVVEYVDDLLELEETS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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