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Report for CCDS2655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2655.1 Public Homo sapiens 3 CNOT10 24 110 108 CCDS HistoryNCBI Gene:25904Re-query CCDS DB by CCDS ID:2655.1Re-query CCDS DB by GeneID:25904See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2655.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328834.10 ENSP00000330060.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328834.10Link to Ensembl Protein Viewer:ENSP00000330060.5Re-query CCDS DB by Nucleotide ID:ENST00000328834Re-query CCDS DB by Protein ID:ENSP00000330060
Original member Current member NCBI NM_015442.3 NP_056257.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015442.3Link to Protein Sequence:NP_056257.1Re-query CCDS DB by Nucleotide ID:NM_015442Re-query CCDS DB by Protein ID:NP_056257Link to BLAST:NP_056257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056257.1 744 Q9H9A5-1 744 100% 0 0

Chromosomal Locations for CCDS 2655.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 32685461 32685482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32703868 32703962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32704811 32704972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32708670 32708820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32713227 32713369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32716225 32716311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32717154 32717237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32720114 32720231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32725450 32725599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32727668 32727870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32733423 32733544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32734800 32734976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32737410 32737490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32759458 32759571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32762733 32762863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32764455 32764490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32764682 32764809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32769887 32769962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 32773457 32773611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2235 nt):
ATGGCTGCAGACAAGCCTGCAGATCAGGGAGCAGAGAAACATGAAGGCACAGGTCAGTCCTCTGGGATCA
CT
GATCAAGAGAAGGAGTTATCCACCAATGCTTTCCAAGCTTTCACATCTGGAAATTATGATGCCTGTCT
A
CAACACCTTGCCTGTCTACAAGATATAAACAAAGATGATTATAAAATAATTTTGAATACAGCAGTAGCT
GAG
TTTTTTAAAAGTAACCAAACAACAACAGATAATTTGAGACAAACACTTAACCAGCTGAAGAATCAGG
TC
CACTCAGCTGTTGAAGAAATGGATGGATTAGATGATGTTGAAAACAGCATGTTGTACTATAATCAAGC
A
GTCATTCTTTATCATCTGCGGCAGTATACAGAAGCCATATCAGTTGGTGAAAAACTTTATCAGTTCATA
GAG
CCTTTTGAAGAAAAATTTGCCCAAGCAGTGTGTTTTTTGCTTGTAGACCTGTATATATTAACCTACC
AA
GCTGAGAAAGCTTTGCATCTTCTTGCTGTCCTAGAAAAAATGATTTCACAGGGTAACAATAACAAAAA
T
GGAAAGAATGAGACTGGTAATAACAACAACAAAGATGGATCTAATCATAAAGCTGAAAGTGGAGCTCTA
ATA
GAAGCTGCAAAATCAAAGATACATCAGTACAAAGTACGAGCTTATATCCAAATGAAGTCTCTGAAAG
CA
TGTAAAAGGGAAATCAAGTCAGTCATGAATACAGCTGGAAATTCCGCACCCTCTCTCTTTCTTAAAAG
C
AATTTTGAGTACTTAAGAGGTAATTATCGAAAAGCCGTGAAGCTATTAAATAGTTCAAACATTGCTGAG
CAT
CCAGGATTCATGAAAACAGGTGAATGCTTGAGATGCATGTTCTGGAATAACCTTGGTTGCATCCATT
TT
GCCATGAGCAAGCACAATTTGGGAATATTCTACTTTAAAAAGGCTCTGCAAGAGAATGACAATGTCTG
T
GCACAGCTCAGTGCAGGTAGCACTGATCCAGGTAAAAAATTTTCAGGAAGACCCATGTGTACGTTACTA
ACC
AATAAGAGATATGAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCACATTGGAAGGCCTCTTGCTG
CC
TTCGAATGTCTGATTGAAGCTGTTCAGGTTTATCATGCAAATCCTCGCCTCTGGCTACGGCTGGCTGA
A
TGCTGCATTGCTGCCAATAAGGGGACTTCTGAACAAGAAACTAAAGGCCTTCCCAGCAAAAAAGGAATT
GTA
CAGTCTATTGTTGGTCAAGGCTATCATCGTAAAATAGTTTTGGCATCACAGTCTATACAGAATACTG
TT
TATAATGATGGGCAGTCTTCGGCCATTCCTGTAGCCAGTATGGAGTTTGCAGCCATATGTCTCAGAAA
T
GCCTTGTTGCTGCTACCTGAAGAACAGCAAGATCCAAAGCAGGAAAATGGGGCTAAAAATAGTAATCAA
TTA
GGTGGGAACACAGAGAGCAGCGAAAGCAGTGAAACTTGCAGCAGTAAAAGCCATGATGGAGATAAAT
TC
ATTCCAGCTCCACCTTCTTCTCCATTGAGAAAACAGGAATTAGAAAACTTAAAGTGCTCCATACTTGC
T
TGCAGTGCCTACGTGGCTCTGGCTTTGGGTGATAACCTCATGGCTTTGAATCATGCAGATAAACTTCTT
CAG
CAGCCCAAGCTGTCAGGATCTCTTAAGTTTTTGGGACATTTATATGCTGCAGAAGCCCTCATCTCTC
TC
GACAGAATATCTGATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGTCTCCTTAGGGATCTC
T
TCAAATGAGCAGGACCAAGGATCAGACAAAGGTGAAAATGAAGCAATGGAATCCTCTGGTAAGCGGGCC
CCT
CAGTGCTACCCCAGTTCCGTCAACTCTGCCAGGACTGTGATGCTGTTCAACCTTGGCAGCGCTTACT
GC
CTGAGGAGCGAATATGACAAAGCCCGAAAGTGTCTCCACCAGGCGGCTTCAATGATCCATCCTAAAGA
G
GTGCCCCCTGAGGCCATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTAATACTCAGCTGGCCTTA
CAG
ATCATCAAAAGGAATCAGCTGCTCCCTGCAGTGAAAACACACTCTGAAGTGAGAAAGAAGCCAGTGT
TT
CAGCCTGTCCACCCGATCCAGCCCATCCAAATGCCGGCTTTCACCACTGTGCAGAGAAAGTGA


Translation (744 aa):
MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDDYKIILNTAVA
E
FFKSNQTTTDNLRQTLNQLKNQ
VHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFI
E
PF
EEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMISQGNNNKNGKNETGNNNNKDGSNHKAESGAL
I
EAAKSKIHQ
YKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAE
H
PGFMKT
GECLRCMFWNNLGCIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLL
T
NKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKG
TSEQETKGLPSKKGI
V
QSIVGQGYHRKIVLASQSIQNTVY
NDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPKQENGAKNSNQ
L
GGNTESSESSETC
SSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSAYVALALGDNLMALNHADKLL
Q
QPKLSGSL
KFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKRA
P
QCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQ
AASMIHPKEVPPEAILLAVYLELQNGNTQLAL
Q
IIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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