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Report for CCDS26232.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26232.1 Public Mus musculus 13 Wdr37 23 108 98 CCDS HistoryNCBI Gene:207615Re-query CCDS DB by CCDS ID:26232.1Re-query CCDS DB by GeneID:207615See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26232.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021572.10 ENSMUSP00000021572.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021572.10Link to Ensembl Protein Viewer:ENSMUSP00000021572.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000021572Re-query CCDS DB by Protein ID:ENSMUSP00000021572
Original member Current member EBI ENSMUST00000054251.12 ENSMUSP00000062174.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054251.12Link to Ensembl Protein Viewer:ENSMUSP00000062174.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000054251Re-query CCDS DB by Protein ID:ENSMUSP00000062174
Original member Current member NCBI NM_001039388.2 NP_001034477.1 Accepted alive Link to Nucleotide Sequence:NM_001039388.2Link to Protein Sequence:NP_001034477.1Re-query CCDS DB by Nucleotide ID:NM_001039388Re-query CCDS DB by Protein ID:NP_001034477Link to BLAST:NP_001034477.1
Original member Current member NCBI NM_172445.3 NP_766033.1 Accepted alive Link to Nucleotide Sequence:NM_172445.3Link to Protein Sequence:NP_766033.1Re-query CCDS DB by Nucleotide ID:NM_172445Re-query CCDS DB by Protein ID:NP_766033Link to BLAST:NP_766033.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034477.1 496 Q8CBE3 496 100% 0 0
NP_766033.1 496 Q8CBE3 496 100% 0 0

Chromosomal Locations for CCDS 26232.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 8805815 8805946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8819863 8819977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8820411 8820545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8835297 8835438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8836783 8837023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8842730 8842806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8844787 8844831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8847615 8847686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8849534 8849669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8853670 8853734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8854000 8854095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8856832 8856928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 8861088 8861225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGCCCACAGAAAGCGGAAGTTGTTCAACTGCTCGCCAAGCAAAACAAAAGCGCAAGTCTCATAGCCTTT
CTATACGAAGAACTAACAGCTCAGAACAAGAGAGGACTGGACTGCCAAGAGAAATGTTAGAAGGACAAGA
TTCTAAACTGCCGTCCTCAGTTCGCAGTACACTGCTGGAATTGTTTGGCCAGATAGAAAGAGAATTTGAA
AATCTTTACATCGAAAACTTAGAATTGCGCAGAGAAATTGATACTCTTAATGAACGTTTAGCTGGTGAAG
GACAAGCGATCGATGGGGCAGAATTGAGTAAGGGCCAACTCAAAACAAAAGCCAGTCACAGTACCAGTCA
GCTTTCTCAGAAGCTTAAGACCACCTACAAGGCTTCCACCAGCAAGATTGTTTCCAGCTTTAAGACTACC
ACATCCAGGGCCATCTGTCAGCTTGTGAAGGAGTATATTGGCCACAGGGATGGCATCTGGGATGTCAGTG
TTACAAGGACACAGCCTATTGTTCTTGGGACAGCATCTGCTGATCACACGGCTTTGTTGTGGAGCATAGA
GACTGGCAAATGTCTTGTCAAGTACGCTGGCCATGTGGGCTCAGTAAATTCTATAAAATTCCATCCCTCA
GAGCAGTTGGCTCTTACTGCTTCTGGAGATCAGACTGCTCATATCTGGAGATACGTGGTACAGCTTCCAA
CACCTCAGCCTGTTGCCGACACTAGTCAACAAATTTCTGGTGAAGATGAAATAGAATGCTCTGATAAAGA
TGAGCCTGACATTGATGGAGACGTGTCCAGTGACTGTCCTACTGTCCGAGTCCCACTGACATCTCTCAAA
AGCCACCAGGGTGTGGTTATTGCTGCTGACTGGCTGGTTGGTGGGAAACAAGTGGTGACAGCCTCATGGG
ACAGAACTGCCAACCTGTATGATGTGGAGACATCTGAACTCGTTCATTCCCTGACAGGGCATGACCAGGA
GTTAACACATTGTTGCACTCACCCCACCCAGCGGCTCGTGGTGACCTCCTCCCGTGACACAACTTTCCGT
CTCTGGGATTTCAGGGACCCTTCCATCCACTCCGTGAATGTTTTCCAAGGACACACGGACACTGTGACCT
CTGCTGTGTTCACTGTGGGAGACAACGTCGTTTCAGGCAGTGATGACCGCACAGTAAAAGTCTGGGATTT
AAAAAATATGAGATCTCCAATTGCGACAATTCGTACAGACTCTGCCATTAATAGGATCAATGTGTGTGTT
GGCCAAAAAATCATAGCCCTCCCCCATGACAACCGGCAAGTGCGATTGTTTGATATGTCGGGAGTGAGGC
TAGCACGGCTTCCCCGGAGCAGCCGACAGGGTCACAGACGAATGGTGTGCTGCTCAGCGTGGAGTGAAGA
CCACCCCATATGCAATCTATTTACCTGTGGGTTCGATAGGCAAGCTATTGGGTGGAACATCAATATTCCT
GCACTGTTACAAGAAAAATAA

Translation (496 aa):
MPTESGSCSTARQAKQKRKSHSLSIRRTNSSEQERTGLPREMLEGQDSKLPSSVRSTLLELFGQIEREFE
NLYIENLELRREIDTLNERLAGEGQAIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTT
TSRAICQLVKEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPS
EQLALTASGDQTAHIWRYVVQLPTPQPVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLK
SHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTSSRDTTFR
LWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWDLKNMRSPIATIRTDSAINRINVCV
GQKIIALPHDNRQVRLFDMSGVRLARLPRSSRQGHRRMVCCSAWSEDHPICNLFTCGFDRQAIGWNINIP
ALLQEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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