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Report for CCDS24696.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24696.1 Public Mus musculus 11 Acsl6 23 108 98 CCDS HistoryNCBI Gene:216739Re-query CCDS DB by CCDS ID:24696.1Re-query CCDS DB by GeneID:216739See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24696.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072178.10 ENSMUSP00000072040.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072178.10Link to Ensembl Protein Viewer:ENSMUSP00000072040.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000072178Re-query CCDS DB by Protein ID:ENSMUSP00000072040
Original member Current member EBI ENSMUST00000093106.11 ENSMUSP00000090795.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000093106.11Link to Ensembl Protein Viewer:ENSMUSP00000090795.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000093106Re-query CCDS DB by Protein ID:ENSMUSP00000090795
Original member Current member EBI ENSMUST00000094194.9 ENSMUSP00000091746.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000094194.9Link to Ensembl Protein Viewer:ENSMUSP00000091746.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000094194Re-query CCDS DB by Protein ID:ENSMUSP00000091746
Original member Current member NCBI NM_001033598.1 NP_001028770.1 Accepted alive Link to Nucleotide Sequence:NM_001033598.1Link to Protein Sequence:NP_001028770.1Re-query CCDS DB by Nucleotide ID:NM_001033598Re-query CCDS DB by Protein ID:NP_001028770Link to BLAST:NP_001028770.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028770.1 697 Q91WC3-1 697 100% 0 0

Chromosomal Locations for CCDS 24696.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 54320178 54320372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54323241 54323355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54323990 54324054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54325066 54325167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54325561 54325660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54327115 54327293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54328402 54328434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54329920 54329971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54335052 54335125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54336936 54337013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54338412 54338546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54339000 54339134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54340497 54340592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54341759 54341831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54345176 54345264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54345878 54345994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54350558 54350701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54352022 54352123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54352991 54353062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 54361060 54361197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2094 nt):
ATGCAGACCCAGGAGATCCTGAGGATCCTGCGGCTGCCCGAGCTATCGGACTTGGGCCAGTTTTTCCGCA
GCCTCTCAGCTACCACCCTCGTGAGTGTGGGTGCACTGGCTGCCGTCCTTGCCTACTGGCTCACTCACCG
GCCAAAGGCCTTGCAACCACCATGCAACCTCCTGAAGCAGTCGGAAGAAGTGGAGGACGGTGGTGGAGCC
CGGCGATCTGTGATTGGGGGTTGCACTCAATTGCTTACCCATTACTATGACGATGCCCGGACCATGTACC
AGGTGTTCCGCCGTGGGCTTAGCATCTCAGGGAATGGACCCTGTCTTGGCTTCCGGAAGCCAGAGCAACC
TTACCAGTGGCTGTCCTACCAAGAGGTGGCCAAAAGGGCTGAATTTCTGGGGTCGGGGCTTCTCCAGCAC
GACTGTAAAGTGGGCACAGAGCAGTTCGTTGGTGTTTTTGCACAAAATCGGCCGGAGTGGATCATTGCCG
AGCTGGCCTGCTACACGTATTCCATGGTGGTGGTACCGCTCTACGACACCCTGGGCCCAGGGTCTATCAG
CTACATCATCAATACTGCGGACATTTGCACGGTAATCGTCGATAAACCCCACAAGGCAACACTTCTGCTG
GAACACGTGGAGAGGAAGGAGACTCCGGGCCTCAAGCTGGTCATCCTCATGGAGCCGTTTGAGGACGCCC
TGAGAGAGAGAGGAAAGAAGTGCGGGGTGGACATCAAGTCCATGCAGGCTATAGAGGACTGTGGCCGAGA
GAATCATCATGCCCCCGTGCCCCCACGGCCTGATGACCTCTCCATCGTGTGTTTCACAAGTGGTACAACA
GGGAACCCCAAAGGTGCAATGCTCACCCACGGGAACGTGGTGGCCGATTTCTCGGGCTTTCTGAAAGTGA
CAGAGAAAGTGATCTTTCCGAGACAGGACGATGTGCTCATCTCCTTCCTGCCTCTGGCTCACATGTTTGA
GAGAGTGATCCAGTCTGTTGTCTACTGCCACGGAGGGCGCGTGGGCTTCTTCCAGGGAGACATCCGCCTC
CTCTCAGATGACATGAAGGCTCTCCGCCCTACCATCTTCCCTGTGGTCCCACGGCTGCTGAATCGGATGT
ATGACAAGATCTTCCACCAGGCAGACACCTCACTAAAGCGCTGGCTCCTGGAGTTTGCAGCAAAGCGCAA
GCAGGCAGAGGTCCGGAGCGGAATCATCAGAAACAATAGTATCTGGGATGAACTCTTCTTTAATAAGATT
CAGGCCAGTCTTGGTGGGCATGTGAGGATGATTGTCACTGGAGCAGCCCCCGCGTCACCAACGGTTCTGG
GATTCCTACGAGCAGCTCTGGGGTGCCAGGTCTATGAAGGTTATGGGCAAACTGAATGCACAGCTGGGTG
TACCTTCACAACGCCAGGGGACTGGACATCAGGGCATGTAGGGGCACCTCTGCCCTGCAACCACATCAAG
CTGGTCGATGCAGAGGAACTCAACTACTGGACCTGCAAAGGAGAAGGAGAGATATGTGTGAAAGGACCAA
ATGTGTTCAAAGGCTACTTAAAAGACGAGGACAGGACAAAGGAGGCCCTGGACAGCGACGGCTGGCTTCA
CACTGGAGACATTGGGAAATGGCTGCCGGAGGGAACACTCAAAATCATTGATCGGAAAAAGCACATATTT
AAACTTGCTCAGGGGGAATATGTTGCGCCAGAGAAGATCGAGAACATCTACATCCGGAGTGAGCCTGTGG
CACAAATCTACGTCCACGGGGACAGCTTAAAGGCCTTTTTGGTTGGCATTGTCGTGCCTGACCCTGAAGT
CATGCCTTCCTGGGCTCAGAAGAAAGGAATCGAAGGGACCTATCAGGAACTCTGCATGAAAAAGGAATTG
AAGAAAGCCATTCTGGATGACATGGTGATGCTGGGGAAAGAAAGCGGACTGCATTCTTTTGAACAGGTTA
AAGCCATTTACATCCATTGTGACATGTTCTCTGTTCAAAATGGTCTGCTGACACCAACACTAAAGGCTAA
GAGACCGGAGCTGAGAGAGTACTTCAAAAAGCAAATAGAAGAGCTTTACTTAGTCTCCGTGTGA

Translation (697 aa):
MQTQEILRILRLPELSDLGQFFRSLSATTLVSVGALAAVLAYWLTHRPKALQPPCNLLKQSEEVEDGGGA
RRSVIGGCTQLLTHYYDDARTMYQVFRRGLSISGNGPCLGFRKPEQPYQWLSYQEVAKRAEFLGSGLLQH
DCKVGTEQFVGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSISYIINTADICTVIVDKPHKATLLL
EHVERKETPGLKLVILMEPFEDALRERGKKCGVDIKSMQAIEDCGRENHHAPVPPRPDDLSIVCFTSGTT
GNPKGAMLTHGNVVADFSGFLKVTEKVIFPRQDDVLISFLPLAHMFERVIQSVVYCHGGRVGFFQGDIRL
LSDDMKALRPTIFPVVPRLLNRMYDKIFHQADTSLKRWLLEFAAKRKQAEVRSGIIRNNSIWDELFFNKI
QASLGGHVRMIVTGAAPASPTVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIK
LVDAEELNYWTCKGEGEICVKGPNVFKGYLKDEDRTKEALDSDGWLHTGDIGKWLPEGTLKIIDRKKHIF
KLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLKAFLVGIVVPDPEVMPSWAQKKGIEGTYQELCMKKEL
KKAILDDMVMLGKESGLHSFEQVKAIYIHCDMFSVQNGLLTPTLKAKRPELREYFKKQIEELYLVSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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