NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24550.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24550.1 Public Mus musculus 11 Ccng1 23 108 98 CCDS HistoryNCBI Gene:12450Re-query CCDS DB by CCDS ID:24550.1Re-query CCDS DB by GeneID:12450See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24550.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020576.7 ENSMUSP00000020576.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020576.7Link to Ensembl Protein Viewer:ENSMUSP00000020576.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000020576Re-query CCDS DB by Protein ID:ENSMUSP00000020576
Original member NCBI NM_009831.2 NP_033961.1 Updated not alive Link to Nucleotide Sequence:NM_009831.2Link to Protein Sequence:NP_033961.1Re-query CCDS DB by Nucleotide ID:NM_009831Re-query CCDS DB by Protein ID:NP_033961
Current member NCBI NM_009831.3 NP_033961.1 Accepted alive Link to Nucleotide Sequence:NM_009831.3Link to Protein Sequence:NP_033961.1Re-query CCDS DB by Nucleotide ID:NM_009831Re-query CCDS DB by Protein ID:NP_033961Link to BLAST:NP_033961.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033961.1 294 P51945 294 100% 0 0

Chromosomal Locations for CCDS 24550.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 40750868 40751059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 40751261 40751359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 40751440 40751518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 40752104 40752357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 40753808 40754068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGATAGAAGTACTGACAACTGACTCTCAGAAACTGCTACACCAGCTGAACACCCTGTTGGAACAGGAGT
CTAGATGTCAGCCAAAGGTCTGCGGCTTGAAACTAATTGAGTCGGCCCATGATAATGGCCTCAGAATGAC
TGCAAGATTACGGGACTTTGAAGTAAAAGATCTACTTAGTCTAACTCAGTTCTTTGGCTTTGACACGGAG
ACATTTTCCCTAGCTGTGAATTTACTGGACAGATTCTTGTCTAAAATGAAGGTACAGGCGAAGCATCTTG
GGTGTGTTGGACTGAGCTGCTTTTATTTGGCTGTGAAAGCGACTGAAGAGGAAAGGAATGTCCCACTGGC
GACTGATTTGATCCGAATAAGTCAGTATAGGTTCACGGTTTCAGACCTGATGAGAATGGAGAAGATTGTG
TTGGAGAAAGTGTGTTGGAAAGTCAAAGCTACTACTGCCTTTCAATTTCTGCAGCTCTATTATTCACTCG
TTCACGACACCTTGCCATTTGAGAGGAGAAACGATCTGAATTTTGAAAGACTAGAAGCCCAACTTAAGGC
CTGCCACTGCAGGATCATATTTTCTAAGGCAAAGCCTTCTGTGCTGGCGCTATCTATCCTTGCGTTGGAG
ATCCAAGCACTGAAATACGTAGAGTTAACAGAAGGAGTAGAATGTATTCAGAAACATTCCAAGATAAGTG
GCCGAGATTTGACCTTCTGGCAAGAGCTTGTTTCCAAGTGTTTAACTGAATATTCATCAAACAAGTGCTC
CAAACCTAACGGTCAGAAGTTGAAATGGATTGTGTCTGGACGCACTGCACGGCAACTGAAGCACAGTTAT
TATAGAATAACTCACCTCCCAACGATTCCTGAGACCATTTGTTAG

Translation (294 aa):
MIEVLTTDSQKLLHQLNTLLEQESRCQPKVCGLKLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGFDTE
TFSLAVNLLDRFLSKMKVQAKHLGCVGLSCFYLAVKATEEERNVPLATDLIRISQYRFTVSDLMRMEKIV
LEKVCWKVKATTAFQFLQLYYSLVHDTLPFERRNDLNFERLEAQLKACHCRIIFSKAKPSVLALSILALE
IQALKYVELTEGVECIQKHSKISGRDLTFWQELVSKCLTEYSSNKCSKPNGQKLKWIVSGRTARQLKHSY
YRITHLPTIPETIC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH