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Report for CCDS24349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24349.1 Public Mus musculus 10 Or9r7 23 108 98 CCDS HistoryNCBI Gene:258669Re-query CCDS DB by CCDS ID:24349.1Re-query CCDS DB by GeneID:258669See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24349.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074161.1 ENSMUSP00000073794.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074161.1Link to Ensembl Protein Viewer:ENSMUSP00000073794.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000074161Re-query CCDS DB by Protein ID:ENSMUSP00000073794
Original member Current member EBI ENSMUST00000215217.1 ENSMUSP00000150606.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215217.1Link to Ensembl Protein Viewer:ENSMUSP00000150606.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000215217Re-query CCDS DB by Protein ID:ENSMUSP00000150606
Original member Current member EBI ENSMUST00000214192.1 ENSMUSP00000150662.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214192.1Link to Ensembl Protein Viewer:ENSMUSP00000150662.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214192Re-query CCDS DB by Protein ID:ENSMUSP00000150662
Original member Current member NCBI NM_146674.1 NP_666885.1 Accepted alive Link to Nucleotide Sequence:NM_146674.1Link to Protein Sequence:NP_666885.1Re-query CCDS DB by Nucleotide ID:NM_146674Re-query CCDS DB by Protein ID:NP_666885Link to BLAST:NP_666885.1

Chromosomal Locations for CCDS 24349.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 130126108 130127055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGAAACTGGAGCAGAGCAGGAACTATACTGAGCTGACAGACTTTATCCTGCTGGGATTCTGGACGTCTC
CAGAAGCACAGGTTCCCTTATTCTTACTGTTCTTGTTTATCTATCTGGTCATTTTATTGGGAAACCTCAG
CATGCTAACTGTCATTAAAATAGACTCCAGACTTCATACACCAATGTATTTCTTTCTCCAAAATTTATCC
TTTTTAGATCTCTGCTATTCCACAGTCATTGCACCCAAAACTCTAGCTACTATTTTCTCCAAGGAAAAGA
AAATTTCATATAATGAATGTGCAACACAGTTCTTTTTCTTTGCTCTTTTCGTTGGAACAGAAGGTTTTCT
TTTGGCTGTGATGGCTTATGACCGCTTCTCAGCCATTTGCTCGCCTTTCCTGTACACAGTCCATATGTCT
CAGCCAGCTTGTATTCGTTTGGTGGCTGGCTCCTATATCTGTGGATGCATCAACTCCATGATACAAACAG
GATTCACCTTCAGCTTGCGTTTCTGTGGAGAAAACAGGCTGGACCACTTTTTCTGTGATGTCCCAGCTCT
GATCAAGATCTCATGTGTTGACACTTTTGTGAATGAGATTGTGTTGTTTATTCTCTCTGCTCTCATCATC
ATCTCCACCATCACTATCATTCTGGTTTCCTATGCCTACATCCTTTCCACTGTCCTGAAGATCCCCTCCA
CCCATGGTAGGAGTAAAACCTTCTCTACATGTGGCTCTCATATAGCAGTGGTGAGTTTATTCTATGGAAC
AGTGTTCTTCATGTATGCTCAGCCTGGGTCCATCTCCTCCCCAGAGAAAAGCAAGATTGTAGCTGTGTTC
TACACACTTATCATCCCAATGCTGAATCCTCTGATTTATAGCTTAAGGAATACAGAGGTAAAAAGTGCTT
TGAAGAAGACATTGCTGAGAAAAATATCCTGGCAGTGA

Translation (315 aa):
MKLEQSRNYTELTDFILLGFWTSPEAQVPLFLLFLFIYLVILLGNLSMLTVIKIDSRLHTPMYFFLQNLS
FLDLCYSTVIAPKTLATIFSKEKKISYNECATQFFFFALFVGTEGFLLAVMAYDRFSAICSPFLYTVHMS
QPACIRLVAGSYICGCINSMIQTGFTFSLRFCGENRLDHFFCDVPALIKISCVDTFVNEIVLFILSALII
ISTITIILVSYAYILSTVLKIPSTHGRSKTFSTCGSHIAVVSLFYGTVFFMYAQPGSISSPEKSKIVAVF
YTLIIPMLNPLIYSLRNTEVKSALKKTLLRKISWQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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