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Report for CCDS24280.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24280.1 Public Mus musculus 10 Esyt1 23 108 98 CCDS HistoryNCBI Gene:23943Re-query CCDS DB by CCDS ID:24280.1Re-query CCDS DB by GeneID:23943See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24280.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026427.7 ENSMUSP00000026427.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026427.7Link to Ensembl Protein Viewer:ENSMUSP00000026427.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000026427Re-query CCDS DB by Protein ID:ENSMUSP00000026427
Original member Current member NCBI NM_011843.2 NP_035973.1 Accepted alive Link to Nucleotide Sequence:NM_011843.2Link to Protein Sequence:NP_035973.1Re-query CCDS DB by Nucleotide ID:NM_011843Re-query CCDS DB by Protein ID:NP_035973Link to BLAST:NP_035973.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035973.1 1092 Q3U7R1-1 1092 100% 0 0

Chromosomal Locations for CCDS 24280.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128510620 128510659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128510980 128511029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128511466 128511571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128511655 128511786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128511869 128511967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128512058 128512218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128512327 128512464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128515686 128515772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128515865 128515936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128516145 128516240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128516359 128516448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128516533 128516581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128516676 128516758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128516954 128517130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128517249 128517395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128517615 128517764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128518928 128519014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128519142 128519213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128519428 128519520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128519599 128519685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128519789 128519837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128520273 128520355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128520644 128520820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128520907 128521030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128521614 128521669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128521827 128521916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128522055 128522127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128522249 128522322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128522421 128522555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128523074 128523115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128525464 128525823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3279 nt):
ATGGAGCACTCCCCTGAAGAGGGCGCCAGCCCCGAGCCGTCAGGGCAGCCCCCTGCCACGGACTCCACGC
GGGACGGGGGCTCCGGGGTCCCACCTGCCGGCCCAGGTGCGGCGAGCGAGGCCCTGGCGGTGCTGACTTC
CTTCGGGCGCCGCTTGTTGGTGCTGGTGCCGGTGTACCTGGCAGGGGCAGCGGGTCTTAGCGTAGGTTTC
GTGCTTTTCGGCCTCGCCCTGTACTTGGGCTGGCGCCGGGTCCGCGATGGGAAAGAACGGAGCCTGAGGG
CAGCGAGGCAGCTGCTGGATGACGAGGAGCGGATCACCGCAGAGACGCTTTATATGAGCCACCGGGAACT
ACCTGCCTGGGTCAGCTTCCCAGATGTGGAAAAGGCCGAATGGCTGAACAAGATCGTGGCTCAGGTGTGG
CCCTTCCTAGGCCAGTATATGGAGAAGCTTCTGGCGGAGACAGTGGCCCCAGCTGTCCGGGGAGCTAACC
CTCATCTGCAGACATTCACATTCACACGTGTGGAGCTGGGTGAAAAGCCATTACGAATCATTGGCGTCAA
AGTTCACCCTAGTCAGAGGAAAGATCAGATTCTGTTGGACTTGAATGTCAGCTATGTAGGTGATGTACAG
ATTGACGTGGAGGTGAAGAAATATTTCTGCAAAGCTGGAGTCAAGGGCATGCAGCTCCATGGTGTCTTGC
GAGTGATTCTTGAGCCACTCACAGGGGACCTTCCTATCGTGGGGGCTGTGTCCATGTTCTTTATCAAACG
CCCGACGCTTGACATCAACTGGACAGGGATGACCAACCTGCTAGATATCCCAGGACTTAGCTCACTCTCT
GACACCATGATCATGGACTCCATTGCTGCCTTCCTCGTGCTCCCTAACCGACTGTTGGTGCCCCTTGTGC
CCGACCTTCAAGATGTGGCCCAGCTGCGGTCCCCACTACCCAGGGGCATTATCCGGATTCACCTGCTGGC
AGCCCGAGGTCTGAGTTCCAAGGACAAGTATGTGAAAGGCCTGATTGAGGGCAAATCGGATCCCTACGCG
CTCGTCCGTGTGGGCACCCAGACGTTCTGCAGCCGTGTCATAGATGAGGAGCTCAACCCTCACTGGGGAG
AGACATATGAGGTGATAGTCCACGAGGTTCCAGGACAGGAGATCGAGGTGGAGGTATTTGACAAAGATCC
AGATAAAGATGATTTTCTGGGAAGAATGAAGCTGGACGTGGGGAAGGTATTACAGGCTGGAGTCCTGGAT
AATTGGTACCCTCTGCAAGGCGGGCAAGGCCAAGTTCACTTGAGACTAGAATGGCTATCACTCCTGCCAG
ATGCAGAGAAGCTGGATCAGGTCCTGCAGTGGAATCGGGGCATCACTTCTCGGCCAGAGCCCCCATCGGC
TGCCATCCTCGTTGTCTACTTGGACCGAGCCCAGGACCTTCCTCTGAAGAAAGGCAACAAGGAACCCAAC
CCCATGGTGCAACTATCAGTTCAGGATGTGACCCGGGAGAGCAAGGCTACCTACAGCACCAACAGCCCGG
TGTGGGAAGAGGCTTTCCGGTTTTTCCTGCAGGACCCTCGAAGCCAGGAGCTTGATGTACAGGTGAAGGA
CGACTCCCGAGCCCTGACTTTAGGGGCCCTGACTCTCCCTCTTGCGCGCCTGTTGACTGCCTCTGAACTC
ACCCTGGACCAGTGGTTCCAGCTCAGCAGCTCAGGCCCAAACTCCAGGCTCTACATGAAACTGGTCATGC
GGATCTTATACTTAGATTACTCGGAAATCCGCTTCCCCACTGTGCCTGGTGCCCAGGACTGGGACCGTGA
GAGCCTAGAGACAGGCAGCAGTGTGGATGCCCCACCTCGGCCCTATCACACAACCCCTAACAGCCACTTT
GGGACTGAGAATGTTCTTCGGATCCATGTATTAGAAGCGCAGGACCTAATTGCCAAAGACCGTTTCTTGG
GAGGCCTGGTGAAGGGCAAATCAGACCCCTACGTCAAACTAAAGGTGGCAGGAAAAAGTTTCCGGACCCA
TGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATGAGGTTTTTGAGGTGATTGTCACATCAATCCCTGGC
CAAGAGCTTGAGATTGAGGTCTTTGATAAGGACTTGGACAAGGATGACTTTTTGGGCAGGTATAAAGTGA
GTCTCACCACAGTGCTCAACAGTGGCTTTCTTGATGAGTGGCTGACCCTGGAGGATGTCCCATCCGGGCG
CCTGCACTTGCGCCTGGAGCGTCTGACCCCTAGACCGACTGCTGCTGAGTTAGAGGAGGTGCTGCAGGTG
AACAGCCTGATCCAGACTCAGAAGAGTTCAGAGCTGGCAGCAGCCCTGCTGTCCGTCTTCCTGGAGCGGG
CAGAAGATCTGCCGCTCCGAAAAGGTACCAAGCCTCCCAGCCCTTACGCTACTATCACCGTGGGAGAGAC
TTCCCATAAAACCAAGACTGTCTCCCAATCTTCGGCCCCTGTCTGGGAGGAGAGTGCCTCTTTTCTCATC
AGGAAGCCACACGCTGAGAGCCTGGAGCTGCAGGTTCGGGGTGAAGGGACCGGCACCCTGGGCTCTGTAT
CCCTTCCTCTCTCTGAGCTCCTCCAGGAGGACCAGCTCTGCCTGGACCACTGGTTTGCACTCAGTGGTCA
GGGCCAGGTGCTGATGAGAGCGCAGCTTGGGATCCTGGTATCTCAGCACTCGGGAGTGGAAGCCCACAGC
CACAGCTACAGCCACAGTCACAGCTCCTCCTCGCTCAATGACGAACCTGAGGCCTTAGGGGGACCCACTC
ACCCTGCCTCCCCGGTCCTAGAGGTCAGGCATCGCCTAACACATGGTGACAGTCCCTCTGAGGCTCCCGT
TGGGCCCCTGGGCCAGGTGAAGCTGACAGTGTGGTACCACAGCGACGAACAAAAGCTGATCAGCATTATT
CACAGCTGCCGGGCCCTTCGACAAAATGGACGTGATCTCCCAGACCCCTATGTGTCAGTGTTGCTGCTCC
CAGACAAGAACCGAAGCACCAAGAGGAAGACCCCGCAGAAGAAGAGGACCCTCAATCCTGAGTTCAATGA
GCGGTTTGAGTGGGATCTGCCCCTGGATGGGACTCTCAGGCGGAAGCTCGATGTCTCTGTGAAGTCAAAC
TCCTCCTTCATGTCACGAGAGCGTGAGCTTCTGGGGAAGGTGCAGCTGGATCTAGCAGAGATAGACCTTT
CCCAGGGTGCAGCCCAGTGGTATGACCTGATGGATGACAGAGATAAGGGCGGTTCCTAG

Translation (1092 aa):
MEHSPEEGASPEPSGQPPATDSTRDGGSGVPPAGPGAASEALAVLTSFGRRLLVLVPVYLAGAAGLSVGF
VLFGLALYLGWRRVRDGKERSLRAARQLLDDEERITAETLYMSHRELPAWVSFPDVEKAEWLNKIVAQVW
PFLGQYMEKLLAETVAPAVRGANPHLQTFTFTRVELGEKPLRIIGVKVHPSQRKDQILLDLNVSYVGDVQ
IDVEVKKYFCKAGVKGMQLHGVLRVILEPLTGDLPIVGAVSMFFIKRPTLDINWTGMTNLLDIPGLSSLS
DTMIMDSIAAFLVLPNRLLVPLVPDLQDVAQLRSPLPRGIIRIHLLAARGLSSKDKYVKGLIEGKSDPYA
LVRVGTQTFCSRVIDEELNPHWGETYEVIVHEVPGQEIEVEVFDKDPDKDDFLGRMKLDVGKVLQAGVLD
NWYPLQGGQGQVHLRLEWLSLLPDAEKLDQVLQWNRGITSRPEPPSAAILVVYLDRAQDLPLKKGNKEPN
PMVQLSVQDVTRESKATYSTNSPVWEEAFRFFLQDPRSQELDVQVKDDSRALTLGALTLPLARLLTASEL
TLDQWFQLSSSGPNSRLYMKLVMRILYLDYSEIRFPTVPGAQDWDRESLETGSSVDAPPRPYHTTPNSHF
GTENVLRIHVLEAQDLIAKDRFLGGLVKGKSDPYVKLKVAGKSFRTHVVREDLNPRWNEVFEVIVTSIPG
QELEIEVFDKDLDKDDFLGRYKVSLTTVLNSGFLDEWLTLEDVPSGRLHLRLERLTPRPTAAELEEVLQV
NSLIQTQKSSELAAALLSVFLERAEDLPLRKGTKPPSPYATITVGETSHKTKTVSQSSAPVWEESASFLI
RKPHAESLELQVRGEGTGTLGSVSLPLSELLQEDQLCLDHWFALSGQGQVLMRAQLGILVSQHSGVEAHS
HSYSHSHSSSSLNDEPEALGGPTHPASPVLEVRHRLTHGDSPSEAPVGPLGQVKLTVWYHSDEQKLISII
HSCRALRQNGRDLPDPYVSVLLLPDKNRSTKRKTPQKKRTLNPEFNERFEWDLPLDGTLRRKLDVSVKSN
SSFMSRERELLGKVQLDLAEIDLSQGAAQWYDLMDDRDKGGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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